We study absorption of ultra high energy neutrinos by the cosmic neutrino background, with full inclusion of the effect of the thermal distribution of the background on the resonant annihilation channel. For a hierarchical neutrino mass spectrum (with at least one neutrino with mass below ∼ 10 −2 eV), thermal effects are important for ultra high energy neutrino sources at z > ∼ 16. The neutrino transmission probability shows no more than two separate suppression dips since the two lightest mass eigenstates contribute as a single species when thermal effects are included. Results are applied to a number of models of ultra high energy neutrino emission. Suppression effects are strong for sources that extend beyond z ∼ 10, which can be realized for certain top down scenarios, such as superheavy dark matter decays, cosmic strings and cosmic necklaces. For these, a broad suppression valley should affect the neutrino spectrum at least in the energy interval 10 12 − 10 13 GeV -which therefore is disfavored for ultra high energy neutrino searches -with only a mild dependence on the neutrino mass spectrum and hierarchy. The observation of absorption effects would indicate a population of sources beyond z ∼ 10, and favor top-down mechanisms; it would also be an interesting probe of the physics of the relic neutrino background in the unexplored redshift interval z ∼ 10 − 100.1 After neutrino decoupling, T is actually defined by Eq. (2.5).