In this work, we report on studies of the nature of the dynamics and hydrophobic binding in cyclodextrins and human serum albumin protein complexes with orange II. With femtosecond time resolution, we examined the proton-transfer and trans-cis isomerization reactions of the ligand in these nanocavities and in pure solvents. Because of confinement at the ground state, the orientational motion in the formed phototautomer is restricted, leading to a rich dynamics. Therefore, the emission lifetimes span a large window of tens to hundreds of picoseconds in the cavities. Possible H-bond interactions between the guest and cyclodextrin do not affect the caged dynamics. For the protein-ligand complexes, slow diffusional motion (Ϸ630 ps) observed in the anisotropy decay indicates that the binding structure is not completely rigid, and the embedded guest is not frozen with the hydrophobic pocket. The ultrafast isomerization and decays are explained in terms of coupling motions between N-N and C-N stretching modes of the formed tautomer. We discuss the role of confinement on the trans-cis isomerization with the cavities and its relationships to frequency and time domains of nanostructure emission.cyclodextrins ͉ protein ͉ H-bond ͉ twisting ͉ anisotropy F emtosecond (fs) studies of caged molecules in nanocavities provide direct information on the relationship between time and space domains of molecular relaxation (1). Therefore, simple and complex (in concept) molecular systems have been studied using cyclodextrins (CDs), proteins, micelles, pores, and zeolites as nanohosts, demonstrating the confinement effect of the hydrophobic nanocavities on the spectroscopy and dynamics of the guests (2-13). Relevant information on the ultrafast dynamics of caged wavepackets involving breaking͞making chemical bonds, and solvation has been acquired.Orange II (OII) (Fig. 1), also called acid orange 7, is a molecule that has O-H . . . N and NAN bonds and may show photoinduced intramolecular proton-transfer (IPT) and transcis isomerization reactions. It is widely used in the dyeing of textiles, food, and cosmetics and thus is found in the wastewaters of the related industries (14). It has been reported that it exists under azoenol (AZO) and ketohydrazone (HYZ) forms (Fig. 1) (15-20). In a water solution, for example, the H-atom within the O-H . . . N intramolecular H-bond is shifted to the nitrogen site, making HYZ structure the most stable one (Ϸ95%) (20). In DMSO, the HYZ population decreases to 70%, and in solid state it becomes the only populated structure (20). Recent x-ray studies of phenyl substituted 1-(arylazo)-2-naphthols showed that this kind of molecules displaying HYZ-AZO tautomerism can form intramolecular resonance-assisted H-bonds from pure N-H . . . O to pure N . . . H-O structures, depending on the phenyl derivative (21, 22). Furthermore, a recent photophysical study of similar molecules in solution has shown the occurrence of a photoinduced proton-transfer reaction in AZO to give HYZ structure with a very low emission qu...