Natural and modified clay minerals have been extensively used for the adsorption/desorption of organic substances, especially pesticides, from waters and wastewater, aiming at pollution control and more efficient use of the herbicides through controlled release. While natural clay minerals efficiently remove organic cations such as paraquat and diquat, the adsorption of anionic or neutral species demands surface chemical modification with, for instance, quaternary ammonium salts containing long alkyl chains. Basic pesticides, on the other hand, are better absorbed in clay minerals modified with polycations. Kinetic studies and adsorption/desorption isotherms provide the parameters needed to evaluate the clay mineral’s adsorptive performance towards the pollutant target. However, the direct comparison of these parameters is complicated because the experimental conditions, the analytical techniques, the kinetic and isotherm models, and the numerical fitting method differ among the various studies. The free-energy-related Langmuir constant depends on the degree of site occupation; that is, it depends on the concentration window used to construct the adsorption isotherm and, consequently, on the analytical technique used to quantify the free concentrations. This paper reviews pesticides’ adsorption on natural and modified clay minerals and proposes guidelines for designing batch adsorption/desorption studies to obtain easily comparable and meaningful adsorption parameters. Articles should clearly describe the experimental conditions such as temperature, contact time, total concentration window, the solution to adsorbent ratio, the analytical technique, and its detection and quantification limits, besides the fitting models. Research should also evaluate the competitive effects of humic substances, colloidal inorganic particles, and ionic strength to emulate real-world adsorption experiments.