Plasma samples were assayed for insulin (Mercordia, Winston Salem, NC Cat# 10-1113-01) and C-peptide (Mercodia, Cat# 10-1136-01) by ELISA (1). Proteins were precipitated from postmortem frozen blood samples by orderly mixing 1 ml of ice-cold acetone, 0.125 ml trichloroacetic acid (6.1 N), and 0.125 ml of thawed frozen blood and vortex vigorously for 1.5 min. After -20 0 C overnight precipitation, the pellets were collected by centrifugation at 13,000 x g for 15 min at 4°C and washed 5 times by vigorous vortex and centrifugation at 8,000 x g for 5 min with 1 ml of acetone and air dry completely before dissolving in 0.5 ml phosphate-buffered saline (PBS) for C-peptide ELISA (2).
SRM-MS analysis
Brief:The method includes: 1) the selection of potential tryptic peptides based on the alternative splicing sites, i.e., pep-U1, -U2, and -U3 peptides are encoded by the exon-1U, and the pep-U4 and pep-U5 peptides are non-canonically encoded by intron-1, and pep-UF (frameshift) by intron-2 (Fig 1 and Fig 2A; Supplemental Table 4). Pep-US is encoded by spliced exon-1UB and exon-2 (Fig 2B and Supplemental Fig 1A-G). The pep-B (B-chain) is encoded by exon-2 and located after the signal peptide, while the pep-A (A-chain) is encoded by exon-3 (Supplemental