2021
DOI: 10.1016/j.virol.2021.02.005
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Updating the influenza virus library at Hokkaido University -It's potential for the use of pandemic vaccine strain candidates and diagnosis

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Cited by 2 publications
(2 citation statements)
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“…Viral RNA samples derived from lung homogenates of BXM-treated mice were extracted using a QIAamp® Viral RNA Mini Kit (QIAGEN) according to the manufacturer's protocol. Next-generation sequencing and analysis were then conducted as previously reported [43], after which amino acid substitutions of viruses were detected using the low frequency variant detection method of CLC Genomic Workbench (CLC bio, Aarhus, Denmark). Sequencing coverage for variant detection of this test was more than 10-fold depth, and the percentage of reads with a quality score greater than 30 was 70%.…”
Section: Methodsmentioning
confidence: 99%
“…Viral RNA samples derived from lung homogenates of BXM-treated mice were extracted using a QIAamp® Viral RNA Mini Kit (QIAGEN) according to the manufacturer's protocol. Next-generation sequencing and analysis were then conducted as previously reported [43], after which amino acid substitutions of viruses were detected using the low frequency variant detection method of CLC Genomic Workbench (CLC bio, Aarhus, Denmark). Sequencing coverage for variant detection of this test was more than 10-fold depth, and the percentage of reads with a quality score greater than 30 was 70%.…”
Section: Methodsmentioning
confidence: 99%
“…Thus, it is necessary to select the strains that will be prevalent in the next season at an early stage, and the prediction may be in error. In contrast, we are in the process of selecting vaccine strains to accommodate any subtype of influenza virus by establishing an influenza virus library that contains 4580 strains [ 174 ]. This strategy, though not yet global, can make a significant contribution to vaccine preparation and the diagnosis of future pandemic influenza viruses.…”
Section: Current Challenges For Controlling the Pandemic Respiratory Virusesmentioning
confidence: 99%