Water security in the water treatment plant has been doubted, and the treatment process may have given unreliable and unsafe water to the public. A newspaper reported on November 19, 2011, that laboratory tests on water samples in Kelantan for each year by the Ministry of Health have found harmful bacteria including Escherichia coli (E. coli) in the water samples. More worryingly, it was stated in a study that chlorine in water treated with high chlorine can be harmful to human health. In 2010, Malaysia has begun to approach a natural treatment technique, namely, riverbank filtration (RBF), and firstly used it at the Water Treatment Plant in Jeli, Kelantan, and Kuala Kangsar, Perak. RBF limitation is the invisible groundwater flow that makes it difficult to predict the transport of contaminants. Managing groundwater is important to ensure that water is aligned in compliance with government legislation and environmental protection. Due to that, this study suggests an implementation of an artificial barrier for microorganism in RBF to sustain the good water quality abstracted from the abstraction well. This pretreatment or purifying method is to improve the effectiveness of RBF in removing pollutants during shock loads and reduce the load placed in the water treatment process.