In recent decades, anthropic disturbances have led to major changes in biological communities. Batata Lake (Oriximiná, Pará State, Brazil) is located in the flood area of the right bank of Trombetas River and received effluents rich in mineral waste due to near mining activities in the 80's, which led to the siltation of 30% of its area and numerous local impacts. We monitored about to 20 years the ichthyofauna of Batata Lake and we assessed if there is still remaining effects of the siltation by bauxite tailings in the affected area. We sampled in Silted and Non-Silted areas in the filling period of 1991 to 2015, using a set of gillnets with mesh sizes between 15 to 70 mm. Differences in taxonomic structure (estimated richness, Simpson's dominance and Shannon's diversity) and in community composition among Silted and Non-Silted areas were evaluated with multivariate analysis, considering year as covariate. We sampled 10,435 individuals classified in 141 species. Only 41 species represented 90% of total abundance, which we considered the numerically dominant fishes in the lake. Among taxonomic indices, only estimated richness exhibited a significant trend through time; high estimated richness in the Silted area during the first years of monitoring and posterior decreasing. This negative slope was highly affected by a single point in 1992, so we considered it a particular case in time and not a real temporal trend. Significant changes in community composition occurred among areas by differentiation in species abundance, and not by species loss. These results show that siltation effects in Batata Lake did not express itself as a loss of biodiversity, but in the reconfiguration of the community composition according to species niche.