2024
DOI: 10.1002/aps3.11607
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Variant calling in polyploids for population and quantitative genetics

Alyssa R. Phillips

Abstract: Advancements in genome assembly and sequencing technology have made whole genome sequence (WGS) data and reference genomes accessible to study polyploid species. Compared to popular reduced‐representation sequencing approaches, the genome‐wide coverage and greater marker density provided by WGS data can greatly improve our understanding of polyploid species and polyploid biology. However, biological features that make polyploid species interesting also pose challenges in read mapping, variant identification, a… Show more

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