Siberia is the largest part of Northern Eurasia covering a total area of approximately 10 million km 2 between the Ural Mountains, Kazakhstan, China, Mongolia and the Russian Far East (Yakovlev et al., 1996;Malyschev, 2000). The considerable richness of Siberian flora, including over 4500 vascular plant species (Malyschev et al., 2005), is thought to be a result of both the palaeogeological history of plant lineages and the influence of the Pleistocene glaciations. Subsequent postglacial colonization resulted in the recent adaptations of extant species to current ecosystems like mountain ranges, steppes, plains (Revushkin, 1987;Malyschev, 2000). According to Takhtadjan (1986), Holarctic Siberia includes the Circum-Boreal, Irano-Turanian and a part of the Western Asian floristic regions.Legumes play a key role in cereal-and legume-based systems of semi-arid regions of Siberia and are commonly used to improve the soil organic matter as well as a valuable natural forage crop due to their excellent nitrogen fixation activity and drought resistance (Fedtschenko, 1972;Yakovlev et al., 1996). Despite their large spatial coverage and ecological and economic relevance, few molecular taxonomic studies have been conducted on Siberian legumes.The genus Hedysarum L., represented by 160-200 species of perennial/annual herbs, semishrubs or small shrubs (Yakovlev et al., 1996;Amirahmadi et al., 2014), is the largest genus of the tribe Hedysareae (Fabaceae). In addition to their crop and fertilization importance, Hedysarum species have been successfully used as melliferous and ornamental plants in landscape architecture (Fedtschenko, 1972;Yakovlev et al., 1996;Xu and Choi, 2010). The valuable medicinal properties of some Hedysarum roots (Krasnoborov et al., 1985) fostered biotechnological analyses of microclonal propagation and in vitro plant cell culturing