Serpins form an enormous superfamily of 40 -60-kDa proteins found in almost all types of organisms, including humans. Most are one-use suicide substrate serine and cysteine proteinase inhibitors that have evolved to finely regulate complex proteolytic pathways, such as blood coagulation, fibrinolysis, and inflammation. Despite distinct functions for each serpin, there is much redundancy in the primary specificity-determining residues. However, many serpins exploit additional exosites to generate the exquisite specificity that makes a given serpin effective only when certain other criteria, such as the presence of specific cofactors, are met. With a focus on human serpins, this minireview examines use of exosites by nine serpins in the initial complex-forming phase to modulate primary specificity in either binary serpin-proteinase complexes or ternary complexes that additionally employ a protein or other cofactor. A frequent theme is down-regulation of inhibitory activity unless the exosite(s) are engaged. In addition, the use of exosites by maspin and plasminogen activator inhibitor-1 to indirectly affect proteolytic processes is considered.Serpins are ubiquitously found in all multicellular organisms and even in some viruses and bacteria (1, 2). They are 40 -60-kDa proteins present both extra-and intracellularly that function mostly as serine and cysteine proteinase inhibitors (1). Well known examples are antithrombin, the principal inhibitor of blood coagulation proteinases; PAI-1, 3 an inhibitor of the plasminogen activators tPA and uPA; and ␣ 1 PI, the principal inhibitor of neutrophil elastase. A characteristic of the processes regulated by these serpins is that they involve mostly proteinase cascades that need to be regulated with respect to both the site where they occur and their duration of action.
Serpin Branched Pathway MechanismAll serpin structures determined so far have the same basic fold, composed of three major -sheets, eight to nine ␣-helices, and an exposed reactive center loop (RCL) that contains the primary recognition site for attacking proteinases (1). Based on secondary structure predictions and the presence of ϳ51 conserved, mostly interior residues, all serpins probably adopt this fold (3). Extensive biochemical studies over the past 30 years have established that serpins inhibit proteinases by a branched pathway suicide substrate inhibition mechanism (1). RCL residues are recognized as a suitable substrate for an attacking proteinase, which binds to form an initial Michaelis-like complex (1). For serine and cysteine proteinases, substrate hydrolysis involves initial cleavage of the scissile bond and formation of an acyl ester (1). Most unusually, the serpin fold represents a metastable conformation. Consequently, upon cleavage of the scissile bond, the N-terminal portion of the cleaved RCL spontaneously and irreversibly inserts into -sheet A as a middle strand through expansion of the sheet and, in so doing, drags the covalently linked proteinase to the bottom of the serpin (1), wher...