2014
DOI: 10.1371/journal.pcbi.1003441
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VBA: A Probabilistic Treatment of Nonlinear Models for Neurobiological and Behavioural Data

Abstract: This work is in line with an on-going effort tending toward a computational (quantitative and refutable) understanding of human neuro-cognitive processes. Many sophisticated models for behavioural and neurobiological data have flourished during the past decade. Most of these models are partly unspecified (i.e. they have unknown parameters) and nonlinear. This makes them difficult to peer with a formal statistical data analysis framework. In turn, this compromises the reproducibility of model-based empirical st… Show more

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Cited by 348 publications
(382 citation statements)
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References 35 publications
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“…The representation of expected reward was localized principally in the vmPFC, a brain region that has been classically implicated in positive valuation of choice options Haber and Knutson, 2010;Peters and Büchel, 2010;Levy and Glimcher, 2012;Bartra et al, 2013). This finding is also consistent with the observation that damage to the vmPFC impairs reward learning in humans and monkeys (Camille et al, 2011;Noonan et al, 2012;Rudebeck et al, 2013). Effort was absent from the expectations reflected in the vmPFC, which is in keeping with previous findings in nonlearning contexts that the vmPFC discounts rewards with delay or pain, but not with effort (Kable and Glimcher, 2007;Peters and Büchel, 2009;Talmi et al, 2009;Plassmann et al, 2010;Prévost et al, 2010).…”
Section: Discussionsupporting
confidence: 63%
See 1 more Smart Citation
“…The representation of expected reward was localized principally in the vmPFC, a brain region that has been classically implicated in positive valuation of choice options Haber and Knutson, 2010;Peters and Büchel, 2010;Levy and Glimcher, 2012;Bartra et al, 2013). This finding is also consistent with the observation that damage to the vmPFC impairs reward learning in humans and monkeys (Camille et al, 2011;Noonan et al, 2012;Rudebeck et al, 2013). Effort was absent from the expectations reflected in the vmPFC, which is in keeping with previous findings in nonlearning contexts that the vmPFC discounts rewards with delay or pain, but not with effort (Kable and Glimcher, 2007;Peters and Büchel, 2009;Talmi et al, 2009;Plassmann et al, 2010;Prévost et al, 2010).…”
Section: Discussionsupporting
confidence: 63%
“…These regions have already been implicated in the representation of not only effort but also negative choice value during nonlearning tasks (Bush et al, 2002;Samanez-Larkin et al, 2008;Croxson et al, 2009;Prévost et al, 2010;Hare et al, 2011;Burke et al, 2013;Kurniawan et al, 2013). The dissociation of vmPFC from dACC is reminiscent of the rodent studies reporting that after a cingulate (but not orbitofrontal) lesion physical cost is no longer integrated into the decision value (Walton et al, 2003;Roesch et al, 2006;Rudebeck et al, 2006), although this analogy should be taken with caution due to anatomical differences between species.…”
Section: Discussionmentioning
confidence: 96%
“…Different sets of parameters were used to fit the hard and control conditions. They were inverted by minimizing free energy, using a variational Bayes approach under the Laplace approximation (40,41), as implemented in the VBA Matlab toolbox (42), available at mbb-team.github.io/VBA-toolbox/). We normalized the dependent and explanatory variables (both proportion of impulsive choice and session number varied between 0 and 1), so that we could use means corresponding to the null hypothesis (0.5 for C, 0 for β and 1 for α) and SDs equal to 1 as priors on free parameters.…”
Section: Methodsmentioning
confidence: 99%
“…This involves maximizing the negative log evidence for the model given the data. This procedure was run using MATLAB code provided by Daunizeau et al (2014).…”
Section: Cluster Analysismentioning
confidence: 99%