Vibrio parahaemolyticus is a halophilic bacterium frequently involved in human outbreaks of seafoodassociated gastroenteritis. For epidemiological purposes, different molecular typing methods, such as pulsedfield gel electrophoresis (PFGE) or ribotyping, have been developed for this pathogen; however, these methods are mostly labor-intensive and time-consuming. In this work, we designed and evaluated three rapid PCR typing methods for this pathogen using primers designed on the basis of the following specific sequences: conserved ribosomal gene spacer sequence (RS), repetitive extragenic palindromic sequence (REP), and enterobacterial repetitive intergenic consensus sequence (ERIC). Typing patterns and clustering analysis indicated that these methods apparently differentiated V. parahaemolyticus strains from reference strains of interspecific Escherichia coli, V. cholerae, and V. vulnificus and were also valuable in subspecies typing of this pathogen. Forty domestic strains of V. parahaemolyticus, representing a wide range of PFGE patterns, were grouped into 15, 27, and 27 patterns, with discrimination indexes of 0.91, 0.97, and 0.98, by RS-, REP-, and ERIC-PCR, respectively. The discriminative abilities of these PCR methods closely approached or even exceeded those of PFGE and ribotyping. REP-PCR is preferable to ERIC-PCR because of the greater reproducibility of its fingerprints, while RS-PCR may be a practical method because it generates fewer amplification bands and patterns than the alternatives.Vibrio parahaemolyticus is a halophilic gram-negative bacterium that causes acute gastroenteritis in humans. Food poisoning caused by this pathogen is generally associated with the consumption of contaminated seafood; this organism is a crucial food-borne pathogen in Taiwan, Japan, and other coastal countries with high rates of seafood consumption (17). Clinical manifestations include diarrhea, abdominal cramps, nausea, vomiting, headache, fever, and chills, with incubation periods ranging from 4 to 96 h (4, 9).Isolates of V. parahaemolyticus can be differentiated by serotyping, and 13 O groups and 71 K types have been identified (7). Serotyping is generally unable to differentiate all isolates originating from different regions or sources. Reliable molecular methods for strain typing would significantly aid epidemiological investigations. Recently, several molecular methods were developed for the subspecies typing of V. parahaemolyticus, namely, pulsed-field gel electrophoresis (PFGE) (33), ribotyping (29), and random amplified polymorphic DNA (RAPD) analysis (30). The PFGE method using SfiI digestion is reliable, achieves high discrimination efficiency, and has been applied to typing of V. parahaemolyticus strains in many situations, such as the first pandemic O3:K6 strains (32), food poisoning outbreaks (28), environmental strains from seafood (31), and nosocomial outbreaks (12). However, the whole process takes several days to complete. Compared with PFGE, RAPD analysis has the merits of being less labor-intensi...