2023
DOI: 10.1101/2023.09.26.557596
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Virulence and transmission biology of the widespread, ecologically important pathogen of zooplankton,Spirobacillus cienkowskii

Nina Wale,
Claire B. Freimark,
Justin Ramirez
et al.

Abstract: Spirobacillus cienkowskii(Spirobacillus,hereafter) is a widely distributed bacterial pathogen of zooplankton (Daphniasp.) that has significant impacts on zooplankton population dynamics. Despite its ecological importance, little is known aboutSpirobacillus’virulence and transmission biology. These knowledge gaps stymie our understanding ofDaphnia-Spirobacillusinteractions and the ecology of the newly described familySilvanigrellaceae,of whichSpirobacillusis the longest studied member. Here, we present our work… Show more

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“…We designed and optimized a probe-based dPCR assay for five parasite targets. Primers for M. bicuspidata and P. ramosa were designed using ITS and 16S sequences, respectively (Shaw, 2019), and primers for S. cienkowskii were designed using the bacterium's 16S sequence (Wale et al, 2023). We used the ITS-1 sequence for B. paedophthorum (Duffy et al, 2015) and part of the small subunit (SSU) sequence for O. pajunii (Dziuba et al, 2023) to create primers and dual-quenched probes (Appendix S1: Table S1).…”
Section: Analysis Of Filtersmentioning
confidence: 99%
“…We designed and optimized a probe-based dPCR assay for five parasite targets. Primers for M. bicuspidata and P. ramosa were designed using ITS and 16S sequences, respectively (Shaw, 2019), and primers for S. cienkowskii were designed using the bacterium's 16S sequence (Wale et al, 2023). We used the ITS-1 sequence for B. paedophthorum (Duffy et al, 2015) and part of the small subunit (SSU) sequence for O. pajunii (Dziuba et al, 2023) to create primers and dual-quenched probes (Appendix S1: Table S1).…”
Section: Analysis Of Filtersmentioning
confidence: 99%