Heterostructure Pd/Bi2WO6 nanocomposites were successful synthesized in ethylene glycol by microwave-assisted deposition method at 300 W for 10 min. Effect of the loaded Pd on phase, composition, morphology and visible-light-driven photocatalytic properties of Bi2WO6 was investigated by X-ray diffraction (XRD), scanning electron microscopy (SEM), transmission electron microscopy (TEM), Fast-Fourier-Transform (FFT) diffraction, UV-visible absorption and X-ray photoelectron spectroscopy (XPS). In this research, good distribution of cubic phase of spherical Pd nanoparticles with particle size of 15–20 nm supported on orthorhombic Bi2WO6 thin nanoplates. The 10% Pd/Bi2WO6 nanocomposites reveal major metallic Pd0 species containing in Bi2WO6 sample. Microwave can be used to synthesize metallic Pd nanoparticles supporting on top of Bi2WO6 nanoplates. Photocatalytic activities of Bi2WO6 loaded with different weight contents of Pd were monitored through photodegradation of cationic rhodamine B (RhB) dye under visible light irradiation of a xenon lamp. The 10% Pd/Bi2WO6 nanocomposites have the highest photocatalytic activity because Pd nanoparticles as electron acceptors promote interfacial charge-transfer through Pd/Bi2WO6 heterojunction.