Schiff bases of the diamines 1,3-diaminopropane, putrescine, and cadaverine and the polyamines spermidine and spermine with pyridoxal or pyridoxal phosphate occur in human urine, as shown by gas chromatographic/mass spectrometric selected ion-monitoring techniques. By use of synthetic standards, procedures were devised for conversion of the Schiff bases to stable derivatives amenable to gas chromatoFraphic/mass spectrometric analysis. These procedures involve borohydride reduction of the C=N double bond, hydrolytic removal of the phosphate group, chromatographic separation from the bulk of urinary constituents, and trifluoroacetylation of polar functional groups. The levels of the polyamine-pyridoxal Schiff bases were estimated to be in the range of pmol/ml of urine.The presence in human urine of Schiff bases of the diamines 1,3-diaminopropane, putrescine, and cadaverine and the polyamines spermidine and spermine with pyridoxal or pyridoxal phosphate (Fig. 1) has been established by gas chromatographic/mass spectrometric selected ion-monitoring techniques. Pyridoxal phosphate undergoes Schiff base formation with a variety of endogenous amines (1). Indeed, the principal storage forms of pyridoxal phosphate are as Schiff base conjugates with various proteins (1-6). To our knowledge, the occurrence of polyamine-pyridoxal Schiff bases in body fluids has not been recognized previously although these conjugates are known synthetically (7,8). EXPERIMENTAL Materials and Instrumentation. All chemicals used were reagent grade; glassware was rinsed in 5 M HC1 prior to use. Gas chromatography/mass spectrometry (gc/ms) experiments were carried out with a DuPont 21-491B mass spectrometer interfaced with a Varian 2700 gas chromatograph. This system is equipped with a four-channel DuPont MSID accessory for selected ion monitoring (SIM) analysis. Outputs from the gas chromatograph flame ionization detector and the selected ion monitors were recorded on a Gould Brush 260 six-channel recorder. The 1 m X 2 mm glass column was packed with 3%