This study was conducted to examine the effects of vitamin D, K and Ca co-supplementation on carotid intima-media thickness (CIMT) and metabolic status in overweight diabetic patients with CHD. This randomised, double-blind, placebo-controlled trial was conducted among sixty-six diabetic patients with CHD. Participants were randomly allocated into two groups to take either 5 µg vitamin D, 90 µg vitamin K plus 500 mg Ca supplements (n 33) or placebo (n 33) twice a day for 12 weeks. Fasting blood samples were obtained at the beginning of the study and after the 12-week intervention period to determine related markers. Vitamin D, K and Ca co-supplementation resulted in a significant reduction in maximum levels of left CIMT (−0·04 (SD 0·22) v. +0·04 (SD 0·09) mm, P = 0·02). Changes in serum vitamin D (+6·5 (SD 7·8) v. +0·4 (SD 2·2) ng/ml, P < 0·001), Ca (+0·6 (SD 0·3) v. +0·1 (SD 0·1) mg/dl, P < 0·001) and insulin concentrations (−0·9 (SD 3·1) v. +2·6 (SD 7·2) µIU/ml, P = 0·01), homoeostasis model for assessment of estimated insulin resistance (−0·4 (SD 1·2) v. +0·7 (SD 2·3), P = 0·01), β-cell function (−2·1 (SD 9·0) v. +8·9 (SD 23·7), P = 0·01) and quantitative insulin sensitivity check index (+0·007 (SD 0·01) v. −0·006 (SD 0·02), P = 0·01) in supplemented patients were significantly different from those in patients in the placebo group. Supplementation resulted in significant changes in HDL-cholesterol (+2·7 (SD 7·0) v. −2·5 (SD 5·7) mg/dl, P = 0·002), high-sensitivity C-reactive protein (−1320·1 (SD 3758·3) v. +464·0 (SD 3053·3) ng/ml, P = 0·03) and plasma malondialdehyde concentrations (−0·4 (SD 0·5) v. −1·0 (SD 1·1) µmol/l, P = 0·007) compared with placebo. Overall, vitamin D, K and Ca co-supplementation for 12 weeks among diabetic patients with CHD had beneficial effects on maximum levels of left CIMT and metabolic status. The effect of vitamin D, K and Ca co-supplementation on maximum levels of left CIMT could be a chance finding.