Responses to warfarin (Coumadin) anticoagulation therapy are affected by genetic variability in both theIn 2007, the US Food and Drug Administration modified the package insert for warfarin (Coumadin) to include information on the relationship of safe and effective dosage to specific single nucleotide polymorphisms (SNPs) in two genes, cytochrome P450 2C9 (CYP2C9) and vitamin K epoxide reductase complex subunit 1 (VKORC1). Warfarin binds to and inhibits vitamin K epoxide reductase (VKOR), encoded by VKORC1, thereby inhibiting activation of vitamin K-dependent clotting factors. A single common VKORC1 SNP Ϫ1639/3673 AϾG defines VKORC1 haplotypes with increased sensitivity to warfarin (group A haplotypes, H1 and H2).1-9 CYP2C9 is responsible for metabolism of Ͼ90% of S-warfarin, the more active enantiomer of warfarin. Two common allelic variants of CYP2C9 with reduced enzymatic activity (CYP2C9*2 and CYP2C9*3) have been associated with reduced metabolism of warfarin, lower required doses of warfarin to achieve adequate anticoagulation, and increased risk of adverse events when beginning warfarin therapy.
-12As a result of increased awareness of the impact of these SNPs on warfarin dosage, it is likely that clinical laboratories will increasingly be asked to provide genotype information for the above genes. Thus, there is a need to evaluate both the analytic and clinical validity of genotyping to make dosing recommendations for warfarin. Several assays for genotyping are now commercially available. We evaluated four platforms for determining relevant SNPs in CYP2C9 and VKORC1: the Third Wave Invader Plus CYP2C9 and VKORC1 reagents, the Cepheid SmartCycler Rapid Genotyping Assay for CYP2C9 and VKORC1 (developed by ParagonDx), the Idaho Technology Warfarin Genotyping Reagents on the Roche LightCycler and the AutoGenomics Infiniti 2C9-VKORC1 assay (now marketed as Warfarin XP).Several different dosing algorithms have been devised that incorporate VKORC1 and CYP2C9 genotype, in addition to demographic and clinical information, to predict optimal warfarin dose. We compared the accuracy of four published algorithms for determining warfarin dosage,