Automated water body detection from satellite imagery is a fundamental stage for urban hydrological studies. In recent years, various deep convolutional neural network (DCNN)-based methods have been proposed to segment remote sensing data collected by conventional RGB or multi-spectral imagery for such studies. However, how to effectively explore the wider spectrum bands of multi-spectral sensors to achieve significantly better performance compared to the use of only RGB bands has been left underexplored. In this paper, we propose a novel deep convolutional neural network model -Multi-Channel Water Body Detection Network (MC-WBDN) -that incorporates three innovative components, a multi-channel fusion module, an Enhanced Atrous Spatial Pyramid Pooling (EASPP) module, and Space-to-Depth (S2D)/Depth-to-Space (D2S) operations, to outperform state-of-the-art DCNN-based water body detection methods. Experimental results convincingly show that our MC-WBDN model achieves remarkable water body detection performance, is more robust to light and weather variations and can better distinguish tiny water bodies compared to other DCNN models.