Background and AimsManual navigation (MN), drawing a bronchoscopic road map simply by looking at the consecutive computed tomography (CT), is feasible and economical. However, scant data about the use of MN in radial endobronchial ultrasound (r‐EBUS) bronchoscopy have been documented till now. We aimed to evaluate the diagnostic performance of r‐EBUS bronchoscopy guided by MN for diagnosing peripheral pulmonary lesions (PPLs) and to determine clinical factors affecting the diagnostic yield.MethodsWe performed a retrospective, cohort study of consecutive patients with PPLs who underwent r‐EBUS bronchoscopic biopsy via guidance of MN from May 2020 to June 2021 in our Respiratory Endoscopic Division. The overall diagnostic yield of MN‐guided r‐EBUS, the factors affecting the yield, and the diagnostic performance for malignancy were evaluated.ResultsA total of 102 patients (103 lesions) were evaluated. The overall diagnostic yield of MN‐guided r‐EBUS was 82.0%, and it ranged from 79.6% to 82.5%, assuming the undermined cases were all positive cases (79.6%) or negatives (82.5%). The sensitivity of MN‐guided r‐EBUS for malignancy was 71.4%, ranging from 68.2% to 71.4%, the specificity was 100%, the positive predictive value was 100%, and the negative predictive value was 67.3%, ranging from 63.8% to 69.0%. The multivariate logistic regression showed that “bronchus sign on CT” was the only predictor of the overall diagnostic yield (odds ratio = 11.5, 95% confidence interval: 1.9–70.9, P = 0.009).ConclusionsMN‐guided r‐EBUS is feasible in diagnosing PPLs, especially for lesions with bronchus sign on CT.