2022
DOI: 10.1016/j.dib.2022.108025
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Whole genome sequence data of Lactiplantibacillus plantarum IMI 507027

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Cited by 7 publications
(7 citation statements)
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“…Detailed genome sequencing data analysis was performed as previously described [5] except for the annotation performed using NCBI Prokaryotic Genome Annotation Pipeline (PGAP) v6.0 [6] . Sequencing produced 6,141,736 raw reads and 1,854,804,272 base pairs.…”
Section: Experimental Design Materials and Methodsmentioning
confidence: 99%
“…Detailed genome sequencing data analysis was performed as previously described [5] except for the annotation performed using NCBI Prokaryotic Genome Annotation Pipeline (PGAP) v6.0 [6] . Sequencing produced 6,141,736 raw reads and 1,854,804,272 base pairs.…”
Section: Experimental Design Materials and Methodsmentioning
confidence: 99%
“…For the DNA extraction, 10 mL MRS Broth cultures were incubated aerobically at +30 ⁰C for 16–17 h. The cells were centrifuged (1780 rcf, 10 min) and the pellet was used for DNA extraction according to previously described procedure [8] .…”
Section: Experimental Design Materials and Methodsmentioning
confidence: 99%
“…Screening for virulence factors was performed using the virulence factor database (VFDB). Default parameters were used except where otherwise stated in previously published study [8] .…”
Section: Experimental Design Materials and Methodsmentioning
confidence: 99%
“…Searches for antimicrobial resistance genes, toxin and virulence factor genes, and plasmid presence in the genome were performed according to a previously described procedure, without modifications ( 9 ). No acquired antimicrobial resistance genes of concern that were above 80% identity and 70% coverage were found.…”
Section: Announcementmentioning
confidence: 99%