Many coral reefs have phase shifted from coral to macroalgal dominance. Ocean acidification (OA) due to elevated CO 2 is hypothesised to advantage macroalgae over corals, contributing to these shifts, but the mechanisms affecting coral-macroalgal interactions under OA are unknown. Here, we show that (i) three common macroalgae are more damaging to a common coral when they compete under CO 2 concentrations predicted to occur in 2050 and 2100 than under present-day conditions, (ii) that two macroalgae damage corals via allelopathy, and (iii) that one macroalga is allelopathic under conditions of elevated CO 2 , but not at ambient levels. Lipid-soluble, surface extracts from the macroalga Canistrocarpus (=Dictyota) cervicornis were significantly more damaging to the coral Acropora intermedia growing in the field if these extracts were from thalli grown under elevated vs ambient concentrations of CO 2 . Extracts from the macroalgae Chlorodesmis fastigiata and Amansia glomerata were not more potent when grown under elevated CO 2 . Our results demonstrate increasing OA advantages seaweeds over corals, that algal allelopathy can mediate coral-algal interactions, and that OA may enhance the allelopathy of some macroalgae. Other mechanisms also affect coral-macroalgal interactions under OA, and OA further suppresses the resilience of coral reefs suffering blooms of macroalgae.Coral reefs are one of the most diverse and complex ecosystems on the planet and provide livelihoods, food, and important ecosystem services for hundreds of millions of people 1 . However, a large proportion of reefs worldwide are severely degraded, and many reefs are on a trajectory of decline 2,3 . A symptom of decline is a reduced cover of reef-building corals and an increased abundance of upright macroalgae 4,5 . Understanding the drivers of macroalgal increases and the effects of coral-macroalgal interactions on reef degradation and resilience is of critical importance for the conservation of reef ecosystems [6][7][8] .The drivers of coral loss and macroalgal increase are varied and include herbivore loss through overfishing or disease, decreased water quality associated with nutrient enrichment and sedimentation, coral mortality caused by predators, hurricanes and cyclones, bleaching and diseases, algal colonization associated with coral morality, and a failure of juvenile corals and fishes to recruit once reefs become algal dominated 2,9-12 . Problems arising from human-induced ocean acidification, that occurs as atmospheric CO 2 is absorbed by the ocean and lowers pH 13 , have also been suggested as potential drivers of elevated algal populations on reefs [14][15][16] . Elevated seawater CO 2 concentrations may enhance fleshy algal growth rates 15,17,18 , reduce coral growth and calcification rates 19 , and strengthen space competition between macroalgae and corals, with outcomes that favour macroalgae over corals 14,15,20 . Habitats with naturally elevated CO 2 concentrations show increased fleshy macroalgal abundance 21 and decreased coral...