Aerosols from filters in air conditioning systems in three indoor environments (staff offices, libraries, and laboratories) across nine universities in Southwest Nigeria were analysed for the presence of endocrine disrupting chemicals (EDCs): methylparaben (MeP), ethylparaben (EtP), propylparaben (PrP), butylparaben (BuP), triclosan (TCS), and bisphenol A (BPA). A total of 102 indoor aerosol samples were collected. The trend for the mean of mean concentrations ( ) of MeP (405 ng/g) < EtP (698.8 ng/g) < PrP (4326 ng/g) > BuP (2962 ng/g) < BPA (4316 ng/g) < TCS (4943 ng/g) in staff offices is consistent with those found in libraries (MeP = 452 ng/g; EtP = 1936 ng/g; PrP = 4046 ng/g; BuP = 2584 ng/g; BPA = 2472 ng/g; and TCS = 5109 ng/ g). However, the values for EDCs in laboratory aerosols are higher than those found in either staff offices or libraries. Aerosols from indoor environments in universities located in high-population-density areas show higher concentrations of EDCs than in universities established in less populated areas. PrP and TCS were predominant in aerosols from staff offices and libraries, while BuP and TCS were the largest contributors to EDCs in aerosols from the laboratories. PrP is the main contributor to the Hazard Quotients of these EDCs, while PrP and BPA contribute more to the Hazard Index. Data for antimicrobials (parabens and TCS) in aerosols from libraries showed a strong correlation with those from staff offices and laboratories, while for BPA there was a strong correlation between data from libraries and laboratories. The strong correlations between pairs of EDCs in aerosols from different indoor environments suggest that they may have similar accumulation tendencies and the same anthropogenic sources, especially in laboratories. Aerosols in offices of most female staff had higher levels of EDCs compared to those of the male. There is a need to focus on regulating the amount of PrP, TCS, and BPA in pharmaceutical, plastics, and personal care products in Nigeria. This study is the first attempt to report the occurrence and distribution of parabens and TCS in indoor aerosols from the West African sub-region.