2023
DOI: 10.3389/fmicb.2023.1154296
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XBB.1.5: A new threatening SARS-CoV-2 Omicron subvariant

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Cited by 10 publications
(6 citation statements)
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“…The NTD and RBD of wild-type variant (WT) consisted of residues 14-526 in chain A of the SARS-CoV-2 spike protein (PDB code: 6VXX) [23]; since several fragments were not resolved in these Cryo-EM structures, SWISS-MODEL [24][25][26] was employed to replenish the missing atoms. Next, we constructed the 3D structure of NTD and RBD (residues 14-525) of XBB.1.5 [27] using Alphafold2 Colab [28,29]. The sequences of WT 1-526 and XBB 1-525 are shown in Figure 10b.…”
Section: System Preparationmentioning
confidence: 99%
“…The NTD and RBD of wild-type variant (WT) consisted of residues 14-526 in chain A of the SARS-CoV-2 spike protein (PDB code: 6VXX) [23]; since several fragments were not resolved in these Cryo-EM structures, SWISS-MODEL [24][25][26] was employed to replenish the missing atoms. Next, we constructed the 3D structure of NTD and RBD (residues 14-525) of XBB.1.5 [27] using Alphafold2 Colab [28,29]. The sequences of WT 1-526 and XBB 1-525 are shown in Figure 10b.…”
Section: System Preparationmentioning
confidence: 99%
“…Positive SARS-CoV-2 patients displayed a notable feature of medical manifestations that appeared 2–14 days after infection [4] , [5] , [6] , [7] , [8] . The common COVID-19 symptoms are fever, cough, chill, difficulties in breathing, fatigue, body aches, and headache are most common [5] , [6] , [9] .…”
Section: Introductionmentioning
confidence: 99%
“…Positive SARS-CoV-2 patients displayed a notable feature of medical manifestations that appeared 2–14 days after infection [4] , [5] , [6] , [7] , [8] . The common COVID-19 symptoms are fever, cough, chill, difficulties in breathing, fatigue, body aches, and headache are most common [5] , [6] , [9] . Several techniques are available to detect SARS-CoV-2, where the gold standard and mostly used technique is reverse transcription polymerase chain reaction (RT-PCR) to identify genetic markers [10] , [11] .…”
Section: Introductionmentioning
confidence: 99%
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“…The RT-PCR test is the most popular kind of NAAT utilized globally 7 . SARS-CoV-2 antigen can be detected more rapidly on nasal swabs than most NAATs 8 . Nasopharyngeal, nasal, nasal mid-turbinate swabs, and nasal or nasopharyngeal wash/aspirate can be used as specimens for both NAATs and Antigen tests.…”
mentioning
confidence: 99%