Objectives The craniosacral therapy is closely related to the herbal meridians, so we try to explore, compare and develop pharmacopuncture that can have a synergistic effect. Methods The craniosacral pharmacopuncture, Hominis placenta pharmacopuncture, jungseongohhyeol pharmacopuncture, bamboo salt pharmacopuncture 1.8%, bamboo salt pharmacopuncture 3.0%, and normal saline, which are used with craniosacral therapy in clinical practice, were all made and prepared by ourselves. In order to compare antioxidant activity, 2,2-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid), 2,2diphenyl-1-picrylhydrazyl, ferric reducing antioxidant powder, total flavonoids, total phenolics methods were all measured. Method validation such as specificity, linearity, precision, and accuracy were performed for craniosacral pharmacopuncture. Results In all antioxidant methods, craniosacral pharmacopuncture showed the highest activity and followed by a Hominis placenta pharmacopuncture. The rest of the pharmacopunctures were measured to have low antioxidant activity. Nodakenin and glycyrrhizin were suitable as index compounds of craniosacral pharmacopuncture and they contained 0.82±0.01 μg/mL and 2.56±0.01 μg/mL respectively. Conclusions Craniosacral pharmacopuncture has the highest activity in all antioxidant activity experiments, which will help activate craniosacral therapy and quality control is possible through standardized research. Such research will contribute to the development of the oriental medicine industry.