The early stages of vertebrate development depend heavily on control of maternally transcribed mRNAs that are stored for long periods in complexes termed messenger ribonucleoprotein particles (mRNPs) and utilized selectively following maturation and fertilization. The transcription factor Yin Yang 1 (YY1) is associated with cytoplasmic mRNPs in vertebrate oocytes; however, the mechanism by which any of the mRNP proteins associate with mRNA in the oocyte is unknown. Here we demonstrate the mechanism by which YY1 associates with mRNPs depends on its direct RNA binding activity. High affinity binding for U-rich single-stranded RNA and A:U RNA duplexes was observed in the nanomolar range, similar to the affinity for the cognate double-stranded DNA-binding element. Similar RNA binding affinity was observed with endogenous YY1 isolated from native mRNP complexes. In vivo expression experiments reveal epitope-tagged YY1 assembled into high molecular mass mRNPs, and assembly was blocked by microinjection of high affinity RNA substrate competitor. These findings present the first clues to how mRNPs assemble during early development.
Yin Yang 1 (YY1)3 is a highly conserved transcription factor of the GLI-Kruppel family that can function as an activator, repressor, or initiator of transcription at a number of cellular and viral promoters (1-3). The activity of YY1 is modified by numerous interactions with other proteins, including c-Myc (4), Sp1 (5, 6), the polycomb group protein EED (7), cAMPresponse element-binding protein (8), the viral protein E1A (9), retinoblastoma protein (10), the GATA1 transcription factor (11), and the specific activator YY1AP (12). YY1 is subject to post-translational modifications such as glycosylation (13), acetylation (14), and phosphorylation (15). It contains four C2H2-type zinc fingers near the C terminus responsible for YY1 DNA binding activity (16), a bipartite activation domain near the N terminus (16), and a transcriptional repression domain near the C terminus (17). The Xenopus laevis homologue is a 43-kDa, 373-amino acid protein sharing a high degree of sequence and structural conservation with mammalian YY1 (18). The second zinc finger knuckle of YY1 is highly homologous with the RNA-binding zinc finger knuckles of the doublestranded RNA-binding protein TFIIIA, particularly in the spacing of key cysteine and histidine residues (19).YY1 clearly plays an important role in early embryonic development; however, there is compelling evidence that it functions through mechanisms other than transcriptional regulation. YY1 is localized entirely to the cytoplasm of mouse oocytes and has a mosaic pattern of nucleocytoplasmic distribution in cells of early embryos (20). Homozygous deletion of YY1 in mice causes peri-implantation lethality, and heterozygotes display severe neurulation defects (20). Studies in Xenopus show YY1 misexpression affects survival, neurulation, and patterning (7,21,22). Biochemical analysis has shown that YY1 is entirely restricted to the cytoplasm during early developm...