Because of the ubiquitous nature of anthropogenic nitrate (NO3(-)) in many parts of the world, determining background concentrations of NO3(-) in shallow ground water from natural sources is probably impossible in most environments. Present-day background must now include diffuse sources of NO3(-) such as disruption of soils and oxidation of organic matter, and atmospheric inputs from products of combustion and evaporation of ammonia from fertilizer and livestock waste. Anomalies can be defined as NO3(-) derived from nitrogen (N) inputs to the environment from anthropogenic activities, including synthetic fertilizers, livestock waste, and septic effluent. Cumulative probability graphs were used to identify threshold concentrations separating background and anomalous NO(3)-N concentrations and to assist in the determination of sources of N contamination for 232 spring water samples and 200 well water samples from karst aquifers. Thresholds were 0.4, 2.5, and 6.7 mg/L for spring water samples, and 0.1, 2.1, and 17 mg/L for well water samples. The 0.4 and 0.1 mg/L values are assumed to represent thresholds for present-day precipitation. Thresholds at 2.5 and 2.1 mg/L are interpreted to represent present-day background concentrations of NO(3)-N. The population of spring water samples with concentrations between 2.5 and 6.7 mg/L represents an amalgam of all sources of NO3(-) in the ground water basins that feed each spring; concentrations > 6.7 mg/L were typically samples collected soon after springtime application of synthetic fertilizer. The 17 mg/L threshold (adjusted to 15 mg/L) for well water samples is interpreted as the level above which livestock wastes dominate the N sources.

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Enteric bacteria, many of which are opportunistic pathogens, were detected in groundwater from springs, wells, and a cave stream in the karst region of southwestern Illinois, and concentrations generally were very high in the springs and cave stream. The two main sources of bacterial contamination were determined to be domestic wastewater treatment discharge and livestock manure. The water chemistry in the springs and caves indicated substantial dilution of any wastewater discharge, but the dilution was not sufficient to lower bacteria concentrations to regulatory levels. High counts of enteric bacteria were found throughout the year, suggesting a continuous source of contamination, most likely domestic wastewater discharge. Although wells generally were less contaminated than springs, wells located in livestock areas usually were contaminated with enteric bacteria, and their water chemistry was indicative of contamination by animal waste.

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