This study focused on chaotic analysis of water level data in different elevations located in the highland and lowland areas. This research was conducted considering the uncertain water level caused by the river flow from highland to lowland areas. The analysis was conducted using the data collected from the four area stations along Pahang River on different time scales which were hourly and daily time series data. The resulted findings were relevant to be used by the local authorities in water resource management in these areas. Two methods were used for the analysis process which included Cao method and phase space plot. Both methods are based on phase space reconstruction that is referring to reconstruction of one dimensional data (water level data) to d-dimensional phase space in order to determine the dynamics of the system. The combination of parameters  and d is required in phase space reconstruction. Results showed that (i) the combination of phase space reconstruction’s parameters gave a higher value of parameters by using hourly time scale compared to daily time scale for different elevation; (ii) different elevation gave impact on the values of phase space reconstructions’ parameters; (iii) chaotic dynamics existed using Cao method and phase space plot for different elevation and time scale. Hence, water level data with different time scale from different elevation in Pahang River can be used in the development of prediction model based on chaos approach.