Solar tray drying is an effective alternative for post-harvest processing of fruits and vegetables. Product quality and uniformity of the desired final moisture content are affected by the uneven air flow and temperature distribution inside the drying chamber. The purpose of this study is to numerically evaluate the operation parameters of a new indirect solar dryer having an appropriate design based on thermal uniformity inside the drying chamber, low construction costs and easy accessibility to resources needed for manufacture. The research was focused on both the investigation of different operation conditions and analysis of the influence of the damper position, which is incorporated into the chimney, on the internal cabinet temperature and air flow distribution. Numerical simulation was carried out with Comsol Multiphysics CFD commercial code using a reduced 2D domain model by neglecting any end effects from the side walls. The analysis of the coupled thermal-fluid model provided the velocity field, pressure distribution and temperature distribution in the solar collector and in the drying chamber when the damper was totally closed, half open and fully open and for different operation conditions. The predicted results were compared with measurements taken in-situ. With progressing computing power, it is conceivable that CFD will continue to provide explanations for more fluid flow, heat and mass transfer phenomena, leading to better equipment design and process control for the food industry.