The objective of this study was to analyze the methylenetetrahydrofolate reductases (
MTHFR
s) C677T and A1298C genotype distributions in couples with unexplained fertility problems (UFP) and healthy controls, and to analyze the genotype and haplotype distribution in spontaneously aborted embryonic tissues (SAET) using allele specific polymerase chain reaction (PCR) in 200 probands with UFP, 353 samples of SAET and 222 healthy controls. The analysis revealed a significant overall representation of the 677T allele in male probands from couples with UFP (
p
= 0.036). The combined genotype distribution for both
MTHFR
polymorphisms was also significantly altered (χ
2
21.73, p <0.001) although female probands made no contribution (χ
2
1.33,
p
= 0.72). The overall representation of the 677T allele was more pronounced in SAET (0.5
vs.
0.351 in controls,
p
<0.001) regardless of the karyotype status (aneuploidy
vs.
normal karyotype). In addition, the frequencies of the CA and CC haplotypes were significantly lower than in the control group (
p
= 0.021 and
p
= 0.001, respectively), whereas the frequency of the TC haplotype was significantly higher than in controls (
p
<0.0001). The presented findings indicate that only male probands contribute to the association of
MTHFR
mutations with fertility problems in grown adults and demonstrate a high prevalence of mutated
MTHFR
genotypes in SAET.
In women, at advanced age QF-PCR can be used alone without karyotyping. In cases with higher risk, especially those with abnormal ultrasound findings, analysis performed only with QF-PCR is not a sufficient diagnostic method.
Purpose: The VKORC1 polymorphism is an important genetic factor affecting warfarin dose requirement. Patients require different warfarin doses in order to achieve the target therapeutic anticoagulation. The aim of our study was to determine the frequency of single nucleotide polymorphisms (SNP) in the VKORC1 gene in the general population, using a simple, rapid, and economical method.
Methods: For genotyping, the restriction fragment length polymorphism (RFLP) of polymerase chain reaction (PCR)–amplified DNA was used and compared to allele– specific polymerase chain reaction. We genotyped 441 DNA samples obtained from the healthy general population in North–Eastern Slovenia. Genotypes for the tested group were evaluated to determine whether the population followed the Hardy–Weinberg equilibrium. The genotypes and allele frequencies were calculated.
Results: The results obtained using the allele–specific polymerase chain reaction were consistent with those obtained using the PCR + RFLP method. The G allele frequency (0.62) was higher than the A allele frequency (0.38) in the general population from North–Eastern Slovenia.
Conclusions: The PCR+RFLP method involved additional manipulation of the PCR products at the expense of analysis time, consumption of reagents and equipment. The allele–specific polymerase chain reaction was a simple and rapid method for the detection of SNP in the VKORC1 gene, and is available in any laboratory with the minimum of equipment and reagents required.
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