In this study, we use a geometric morphometric and a character evolution approach to study the evolutionary patterns of body-shape change and habitat transition in the Aulopiformes. Aulopiform fishes (lizardfishes; 289 spp.) inhabit diverse marine habitats from coral reefs to the deep sea and exhibit a wide range of body morphologies. Herein, we examine over 400 aulopiform specimens representing 38 of 44 genera and all families and identify that there are distinct patterns of body-shape change across the aulopiform radiation that coincide with habitat. A fusiform (torpedoshaped) body is predominant among aulopiforms distributed in inshore-benthic and deep-sea benthic environments (e.g., Aulopidae, Bathysauridae, Synodontidae). There is a trend towards body elongation in taxa distributed in deepsea pelagic habitats at depths of 200-4,000 meters (e.g., Alepisauridae, Lestidiidae, Notosudidae, Paralepididae) and a trend of body elongation with more centrally positioned dorsal and anal fins in the deep-benthic family Ipnopidae (tripodfishes). Additionally, deep-sea pelagic aulopiforms exhibit the largest variance in body-shape disparity with significant shape disparity compared to aulopiforms found in inshore-benthic and deep-sea environments. Deep-sea benthic lineages also have significantly higher body-shape variance and disparity compared to inshore-benthic lineages. We identify that there are considerable changes in body shape as aulopiform lineages transitioned to differing marine habitats. We infer the common ancestor of aulopiforms to have lived in a deep-sea benthic environment with a single transition to an inshore-benthic environment in the common ancestor of the Aulopoidei (lizardfishes, flagfin fishes) and two independent transitions into deep-sea pelagic environments, once in the common ancestor of Giganturidae, and once in the common ancestor of Alepisauroidea þ Notosudoidea. This is the first study to quantitatively investigate changes in the body shape of aulopiform fishes tied to habitat transitions in marine environments from the deep sea to coral reefs. Our findings suggest that aulopiform body plans have broadly diversified in deep-sea pelagic and benthic habitats while remaining comparatively conservative in inshore-benthic habitats.

Bacterial bioluminescent organs in fishes have a diverse range of tissues of origin, patterns of compartmentalization, and associated light‐conducting structures. The morphology of the perianal, bacterial bioluminescent organ of Aulotrachichthys prosthemius was described previously, but the light organ in other species of slimeheads, family Trachichthyidae, is poorly known. Here, we describe the anatomy of the bioluminescent organs in trachichthyids and places the evolution of this light‐producing system in the context of a new phylogeny of the Trachichthyoidei to test the hypothesis that bioluminescence evolved twice in the suborder and that the light‐producing component derives from the perianal ectoderm. We use gross and histological examination to provide the first description of the bioluminescent organ of Paratrachichthys and four additional species of Aulotrachichthys. Observations also strongly suggest the presence of a perianal bioluminescent organ in Sorosichthys ananasa. The updated phylogeny of the Trachichthyoidei is the first to combine morphological and DNA‐sequence (11‐gene fragments) evidence, and supports a monophyletic Trachichthyidae with component subfamilies Hoplostethinae and Trachichthyinae, supporting continued recognition of the family Anoplogastridae. All bioluminescent trachichthyoids share a similar bioluminescent‐organ structure with elongate chambers filled with bacteria and connected to collecting ducts that, in turn, connect to superficial ducts that lead to and have lining epithelia continuous with the epidermis. In the context of the phylogeny, the bioluminescent organ of trachichthyids is inferred to have evolved as an elaboration of the proctodeum in the ancestor of Aulotrachichthys, Paratrachichthys, and Sorosichthys independently from the structurally similar cephalic bioluminescent organs in Anomalopidae and Monocentridae.

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