The reconstruction of computed tomography (CT) images is an active area of research. Following the rise of deep learning methods, many data-driven models have been proposed in recent years. In this work, we present the results of a data challenge that we organized, bringing together algorithm experts from different institutes to jointly work on quantitative evaluation of several data-driven methods on two large, public datasets during a ten day sprint. We focus on two applications of CT, namely, low-dose CT and sparse-angle CT. This enables us to fairly compare different methods using standardized settings. As a general result, we observe that the deep learning-based methods are able to improve the reconstruction quality metrics in both CT applications while the top performing methods show only minor differences in terms of peak signal-to-noise ratio (PSNR) and structural similarity (SSIM). We further discuss a number of other important criteria that should be taken into account when selecting a method, such as the availability of training data, the knowledge of the physical measurement model and the reconstruction speed.
Over recent years, deep learning methods have become an increasingly popular choice for solving tasks from the field of inverse problems. Many of these new data-driven methods have produced impressive results, although most only give point estimates for the reconstruction. However, especially in the analysis of ill-posed inverse problems, the study of uncertainties is essential. In our work, we apply generative flow-based models based on invertible neural networks to two challenging medical imaging tasks, i.e., low-dose computed tomography and accelerated medical resonance imaging. We test different architectures of invertible neural networks and provide extensive ablation studies. In most applications, a standard Gaussian is used as the base distribution for a flow-based model. Our results show that the choice of a radial distribution can improve the quality of reconstructions.
Learning neural networks using only a small amount of data is an important ongoing research topic with tremendous potential for applications. In this paper, we introduce a regularizer for the variational modeling of inverse problems in imaging based on normalizing flows. Our regularizer, called patchNR, involves a normalizing flow learned on patches of very few images. The subsequent reconstruction method is completely unsupervised and the same regularizer can be used for different forward operators acting on the same class of images. By investigating the distribution of patches versus those of the whole image class, we prove that our variational model is indeed a MAP approach. Our model can be generalized to conditional patchNRs, if additional supervised information is available. Numerical examples for low-dose CT, limited-angle CT and superresolution of material images demonstrate that our method provides high quality results among unsupervised methods, but requires only few data.
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