The unceasing development of new small products has increased constantly by introducing multiple facilities in line production, reduced life cycles of new innovative products, and high-precision techniques that require automation and robotization of the nanotechnology production processes. Classic size products are made in normal series and deal little change over the years, while in the field of nanotechnology, product life cycles were shortened significantly, and series production must adapt to the market challenges. Considering the fast changes and multiple innovations in production, we propose equipment that offers a high degree of flexibility and performance for quality products. To compensate efficiently, the fluctuations may appear in production series; a flexible control system is designed to adjust production for large number of items or for various models of processing. The control equipment dedicated to nanotechnologies developed by INCDMTM Bucharest offers solutions for automation processes adapted to various operations and for quick response occurring in nano-production. A modular special design offers flexibility during the process, handling and interoperable ones, along with the possibility of changes facilitated by software that controls the entire verification process and parameter selection for each checked item's admissibility.