According to the amyloid hypothesis, the pathogenesis of Alzheimer's disease is triggered by the oligomerization and aggregation of the amyloid- (A) peptide into protein plaques. Formation of the potentially toxic oligomeric and fibrillar A assemblies is accompanied by a conformational change toward a high content of -structure. Here, we report the solution structure of A(1-40) in complex with the phage-display selected affibody protein ZA3, a binding protein of nanomolar affinity. Bound A(1-40) features a -hairpin comprising residues 17-36, providing the first highresolution structure of A in  conformation. The positions of the secondary structure elements strongly resemble those observed for fibrillar A. ZA3 stabilizes the -sheet by extending it intermolecularly and by burying both of the mostly nonpolar faces of the A hairpin within a large hydrophobic tunnel-like cavity. Consequently, Z A3 acts as a stoichiometric inhibitor of A fibrillation. The selected A conformation allows us to suggest a structural mechanism for amyloid formation based on soluble oligomeric hairpin intermediates.A-peptide ͉ engineered binding protein ͉ molecular recognition ͉ protein structure ͉ nuclear magnetic resonance
We describe the development of a novel serum albumin binding protein showing an extremely high affinity (K(D)) for HSA in the femtomolar range. Using a naturally occurring 46-residue three-helix bundle albumin binding domain (ABD) of nanomolar affinity for HSA as template, 15 residues were targeted for a combinatorial protein engineering strategy to identify variants showing improved HSA affinities. Sequencing of 55 unique phage display-selected clones showed a strong bias for wild-type residues at nine positions, whereas various changes were observed at other positions, including charge shifts. Additionally, a few non-designed substitutions appeared. On the basis of the sequences of 12 variants showing high overall binding affinities and slow dissociation rate kinetics, a set of seven 'second generation' variants were constructed. One variant denoted ABD035 displaying wild-type-like secondary structure content and excellent thermal denaturation/renaturation properties showed an apparent affinity for HSA in the range of 50-500 fM, corresponding to several orders of magnitude improvement compared with the wild-type domain. The ABD035 variant also showed an improved affinity toward serum albumin from a number of other species, and a capture experiment involving human serum indicated that the selectivity for serum albumin had not been compromised from the affinity engineering.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.
customersupport@researchsolutions.com
10624 S. Eastern Ave., Ste. A-614
Henderson, NV 89052, USA
This site is protected by reCAPTCHA and the Google Privacy Policy and Terms of Service apply.
Copyright © 2024 scite LLC. All rights reserved.
Made with 💙 for researchers
Part of the Research Solutions Family.