Rates of trait evolution are known to vary across phylogenies; however, standard evolutionary models assume a homogeneous process of trait change. These simple methods are widely applied in small‐scale phylogenetic studies, whereas models of rate heterogeneity are not, so the prevalence and patterns of potential rate variation in groups up to hundreds of species remain unclear. The extent to which trait evolution is modelled accurately on a given phylogeny is also largely unknown because studies typically lack absolute model fit tests. We investigated these issues by applying both rate‐static and variable‐rates methods on (i) body mass data for 88 avian clades of 10–318 species, and (ii) data simulated under a range of rate‐heterogeneity scenarios. Our results show that rate heterogeneity is present across small‐scaled avian clades, and consequently applying only standard single‐process models prompts inaccurate inferences about the generating evolutionary process. Specifically, these approaches underestimate rate variation, and systematically mislabel temporal trends in trait evolution. Conversely, variable‐rates approaches have superior relative fit (they are the best model) and absolute fit (they describe the data well). We show that rate changes such as single internal branch variations, rate decreases and early bursts are hard to detect, even by variable‐rates models. We also use recently developed absolute adequacy tests to highlight misleading conclusions based on relative fit alone (e.g. a consistent preference for constrained evolution when isolated terminal branch rate increases are present). This work highlights the potential for robust inferences about trait evolution when fitting flexible models in conjunction with tests for absolute model fit.
While global patterns of human genetic diversity are increasingly well characterized, the diversity of human languages remains less systematically described. Here, we outline the Grambank database. With over 400,000 data points and 2400 languages, Grambank is the largest comparative grammatical database available. The comprehensiveness of Grambank allows us to quantify the relative effects of genealogical inheritance and geographic proximity on the structural diversity of the world’s languages, evaluate constraints on linguistic diversity, and identify the world’s most unusual languages. An analysis of the consequences of language loss reveals that the reduction in diversity will be strikingly uneven across the major linguistic regions of the world. Without sustained efforts to document and revitalize endangered languages, our linguistic window into human history, cognition, and culture will be seriously fragmented.
While global patterns of human genetic diversity are increasingly well characterized, the diversity of human languages remains less systematically described. Here we outline the Grambank database. With over 400,000 data points and 2,400 languages, Grambank is the largest comparative grammatical database available. The comprehensiveness of Grambank allows us to quantify the relative effects of genealogical inheritance and geographic proximity on the structural diversity of the world's languages, evaluate constraints on linguistic diversity, and identify the world's most unusual languages. An analysis of the consequences of language loss reveals that the reduction in diversity will be strikingly uneven across the major linguistic regions of the world. Without sustained efforts to document and revitalize endangered languages, our linguistic window into human history, cognition and culture will be seriously fragmented.
Dogs have an extraordinary relationship with humans. We understand, communicate, and cooperate remarkably with our dogs. But almost all we know about dog-human bonds, dog behaviour, and dog cognition is limited to Western, Educated, Industrialized, Rich, Democratic (WEIRD) societies. WEIRD dogs are kept for a variety of functions, and these can influence their relationship with their owner, as well as their behaviour and performance in problem-solving tasks. But are such associations representative worldwide? Here we address this by collecting data on the function and perception of dogs in 124 globally distributed societies using the eHRAF cross-cultural database. We hypothesize that keeping dogs for multiple purposes and/or employing dogs for highly cooperative or high investment functions (e.g., herding, guarding of herds, hunting) will lead to closer dog-human bonds: increased primary caregiving (or positive care), decreased negative treatment, and attributing personhood to dogs. Our results show that indeed, the number of functions associates positively with close dog-human interactions. Further, we find increased odds of positive care in societies that use herding dogs (an effect not replicated for hunting), and increased odds of dog personhood in cultures that keep dogs for hunting. Unexpectedly, we see a substantial decrease of dog negative treatment in societies that use watchdogs. Overall, our study shows the mechanistic link between function and the characteristics of dog-human bonds in a global sample. These results are a first step towards challenging the notion that all dogs are the same, and open questions about how function and associated cultural correlates could fuel departures from the ‘typical’ behaviour and social-cognitive skills we commonly associate with our canine friends.
The Uto-Aztecan language family is one of the largest language families in the Americas.However, there has been considerable debate about its origin and how it spread. Here we use Bayesian phylogenetic methods to analyze lexical data from 34 Uto-Aztecan varieties and 2 Kiowa-Tanoan languages. We infer the age of Proto-Uto-Aztecan to be around 4,100 years ago (3,258 -5,025 years), and identify the most likely homeland to be near what is now southern California. We reconstruct the most probable subsistence strategy in the ancestral Uto-Aztecan society and infer no casual or intensive cultivation, an absence of cereal crops, and a primary subsistence mode of gathering (rather than agriculture). Our results therefore support the timing, geography, and cultural practices of a northern origin, and are inconsistent with alternative scenarios.
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