Background: Sortase enzymes catalyze a transpeptidation reaction that displays bacterial surface proteins. Results: Structural and computational studies reveal how the sortase B enzyme recognizes its sorting signal substrate. Conclusion: Sortase enzymes catalyze transpeptidation using a substrate-stabilized oxyanion hole. Significance: The results of this work could facilitate the rational design of sortase inhibitors.
Metastasis is a fundamentally physical process in which cells are
required to deform through narrow gaps as they invade surrounding tissues and
transit to distant sites. In many cancers, more invasive cells are more
deformable than less invasive cells, but the extent to which mechanical
phenotype, or mechanotype, can predict disease aggressiveness in pancreatic
ductal adenocarcinoma (PDAC) remains unclear. Here we investigate the invasive
potential and mechanical properties of immortalized PDAC cell lines derived from
primary tumors and a secondary metastatic site, as well as noncancerous
pancreatic ductal cells. To investigate how invasive behavior is associated with
cell mechanotype, we flow cells through micron-scale pores using parallel
microfiltration and microfluidic deformability cytometry; these results show
that the ability of PDAC cells to passively transit through pores is only weakly
correlated with their invasive potential. We also measure the Young’s
modulus of pancreatic ductal cells using atomic force microscopy, which reveals
that there is a strong association between cell stiffness and invasive potential
in PDAC cells. To determine the molecular origins of the variability in
mechanotype across our PDAC cell lines, we analyze RNAseq data for genes that
are known to regulate cell mechanotype. Our results show that vimentin, actin,
and lamin A are among the most differentially expressed mechanoregulating genes
across our panel of PDAC cell lines, as well as a cohort of 38 additional PDAC
cell lines. We confirm levels of these proteins across our cell panel using
immunoblotting, and find that levels of lamin A increase with both invasive
potential and Young’s modulus. Taken together, we find that stiffer PDAC
cells are more invasive than more compliant cells, which challenges the paradigm
that decreased cell stiffness is a hallmark of metastatic potential.
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