Long-distance migration of Atlantic salmon (Salmo salar) is known to result in high levels of mortality. For a species experiencing global population decline, it is thus vital to better understand migration behaviour, both in the river and marine stages. Atlantic salmon smolts (n = 50) were tracked using acoustic telemetry in the River Deveron, Scotland, and adjacent coastal area. Higher rates of mortality were observed in the river (0.77% per km) than the early marine stage of migration (0.0% per km). Mortality likely resulted from predation. Higher swim speeds were recorded in the early marine stage compared with the river (marine = 7.37 ± 28.20 km/day; river = 5.03 ± 1.73 km/ day [mean ± SD]), a potential predator avoidance behaviour. The majority of smolts leaving the river did so in darkness and on a flooding tide. Overall river and marine migration success were linked to nights of lower lunar brightness. Marine migration speed decreased with increasing environmental noise levels, a finding with implications for fisheries management. The migration pathway in the early marine environment did not follow obvious geographical features, such as the coastline. Thus, we suggest that early marine environment pathways are more influenced by complex water currents. These findings highlight factors that influence smolt migration survival and behaviour, areas on which future research should focus. K E Y W O R D S acoustic, biotelemetry, marine, migration, salmon, smolt How to cite this article: Lothian AJ, Newton M, Barry J, Walters M, Miller RC, Adams CE. Migration pathways, speed and mortality of Atlantic salmon (Salmo salar) smolts in a Scottish river and the near-shore coastal marine environment. Ecol Freshw

Acoustic telemetry was used to track salmon smolts during river migration and into the open marine coastal zone. We compared migration direction and speed with particle tracking simulations to test the hypothesis that marine migration pathways are defined by active swimming current following behaviour. Habitat-specific survival rates, movement speeds, depths and directions in riverine, estuarine, and coastal habitats were also quantified. Salmon post-smolts did not disperse at random as they entered the unrestricted, coastal zone of the North sea; rather they chose a common migration pathway. This was not the most direct route to marine feeding grounds (ca. 44° N); north in the direction of the prevailing currents. Particle modelling showed that the actual post-smolt migration route was best predicted by active swimming at 1.2 body length.sec.−1 at a bearing of 70° from north but not by current following behaviour. Fish migrating in larger groups and earlier in the migration period had increased migration success. We conclude that: post-smolts have preferred migration routes that are not predicted by the shortest direction to their ultimate destination; they do not simply use the current advantage to migrate; and that they actively swim, occasionally directly against the current prevailing at the time.

Fishways are commonly employed to improve river connectivity for fishes, but the extent to which they cater for natural phenotypic diversity has been insufficiently addressed. We measured differential upstream passage success of three wild brown trout (Salmo trutta) phenotypes (anadromous, freshwater-resident adult and parr-marked), encompassing a range of sizes and both sexes, at a Larinier superactive baffle fishway adjacent to a flow-gauging weir, using PIT telemetry (n=160) and radio telemetry (n=53, double tagged with PIT tags).Fish were captured and tagged downstream of the weir in the autumn pre-spawning period, 2017, in a tributary of the River Wear, England, where over 95% of tributary spawning habitat was available upstream of the weir. Of 57 trout that approached the weir-fishway complex, freshwater-resident adult and parr-marked phenotypes were less successful in passing than anadromous trout (25%, 36%, and 63% passage efficiency, respectively). Seventy-one percent of anadromous trout that passed upstream traversed the weir directly. Although the fishway facilitated upstream passage, it was poor in attracting fish of all phenotypes (overall attraction efficiency, 22.8%). A higher proportion (68.2%) of parr-marked trout that approached the weir were male and included sexually mature individuals, compared with that of freshwater-resident (37.8%) and anadromous trout (37.0%). The greater passage success of anadromous trout was likely due to their greater size and locomotory performance compared to the other phenotypes.Barriers and fishways can act as selection filters, likely the case in this study, and greater consideration needs to be given to supporting natural diversity in populations when proposing fishway designs to mitigate river connectivity problems.

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Variations in behavioral traits are widely recognized to drive animal behaviors exhibited within a population. However, information on how behavior traits influence behavior in anthropogenically modified habitats is lacking. Many habitats have become highly fragmented as a result of human processes. To mitigate this and improve habitat connectivity, wildlife passes are increasingly employed, with the aim of enabling animals to move freely between habitats. However, wildlife passes (e.g., fishways) are not always effective in achieving passage and it remains uncertain what factors play a role in an individual's likelihood of passing successfully. This study measured three behavioral traits (boldness, exploration, and activity) in juvenile brown trout (Salmo trutta; n = 78) under field conditions within a river and tested whether these behavior traits influenced both the passage success and the behaviors exhibited during upstream fishway passage attempts. Although behavioral traits were found and collapsed into two behavioral trait dimensions, behavioral traits had low repeatability and so did not contribute to a personality spectrum. Boldness was found to negatively influence the number of passage attempts carried out by an individual and to positively influence passage success, with bolder individuals carrying out fewer attempts and having an increased probability of passage success. No behavioral traits were found to be related to other passage metrics (passage success, Time until First Attempt, and Passage Duration) during the first passage. But all three behavioral traits were significantly negatively related to the changes in passage behaviors at consecutive, successful passage attempts, with bolder, more exploratory and more active individuals passing through a fishway quicker on the second passage than on the first. This study suggests that bolder and more active individuals may perform better during fishway passage attempts, particularly within rivers where multiple barriers to movement exist.