An 15N-enriched sample of the yeast iso-1-ferricytochrome c triple variant (Lys72Ala/Lys79Ala/Cys102Thr) in an alkaline conformation was examined by NMR spectroscopy. The mutations were planned
to produce a cytochrome c with a single conformer. Despite suboptimal conditions for the collection of
spectra (i.e., pH ≈ 11), NMR remains a suitable investigation technique capable of taking advantage of
paramagnetism. 76% of amino acids and 49% of protons were assigned successfully. The assignment
was in part achieved through standard methods, in part through the identification of groups maintaining
the same conformation as in the native protein at pH 7 and, for a few other residues, through a tentative
analysis of internuclear distance predictions. Lys73 was assigned as the axial ligand together with His18.
In this manner, 838 meaningful NOEs for 108 amino acids, 50 backbone angle constraints, and 203
pseudocontact shifts permitted the convergence of randomly generated structures to a family of conformers
with a backbone RMSD of 1.5 ± 0.2 Å. Most of the native cytochrome c conformation is maintained at high
pH. The NOE pattern that involves His18 clearly indicates that the proximal side of the protein, including
the 20s and 40s loops, remains essentially intact. Structural differences are concentrated in the 70−80
loop, because of the replacement of Met80 by Lys73 as an axial ligand, and in the 50s helix facing that
loop; as a consequence, there is increased exposure of the heme group to solvent. Based on several
spectral features, we conclude that the folded polypeptide is highly fluxional.
Charge translocation by Na(+),K(+)-ATPase was investigated by adsorbing membrane fragments containing Na(+),K(+)-ATPase from pig kidney on a solid supported membrane (SSM). Upon adsorption, the ion pumps were activated by performing ATP concentration jumps at the surface of the SSM, and the capacitive current transients generated by Na(+),K(+)-ATPase were measured under potentiostatic conditions. To study the behavior of the ion pump under multiple turnover conditions, ATP concentration jump experiments were carried out in the presence of Na(+) and K(+) ions. Current transients induced by ATP concentration jumps were also recorded in the presence of the enzyme alpha-chymotrypsin. The effect of acylphosphatase (AcP), a cytosolic enzyme that may affect the functioning of Na(+),K(+)-ATPase by hydrolyzing its acylphosphorylated intermediate, was investigated by performing ATP concentration jumps both in the presence and in the absence of AcP. In the presence of Na(+) but not of K(+), the addition of AcP causes the charge translocated as a consequence of ATP concentration jumps to decrease by about 50% over the pH range from 6 to 7, and to increase by about 20% at pH 8. Conversely, no appreciable effect of pH upon the translocated charge is observed in the absence of AcP. The above behavior suggests that protons are involved in the AcP-catalyzed dephosphorylation of the acylphosphorylated intermediate of Na(+),K(+)-ATPase.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.