Due to the possibilities in miniaturization and wearability, photoplethysmography (PPG) has recently gained a large interest not only for heart rate measurement, but also for estimating heart rate variability, which is derived from ECG by convention. The agreement between PPG and ECG-based HRV has been assessed in several studies, but the feasibility of PPG-based HRV estimation is still largely unknown for many conditions. In this study, we assess the feasibility of HRV estimation based on finger PPG during rest, mild physical exercise and mild mental stress. In addition, we compare different variants of signal processing methods including selection of fiducial point and outlier correction. Based on five minutes synchronous recordings of PPG and ECG from 15 healthy participants during each of these three conditions, the PPG-based HRV estimation was assessed for the SDNN and RMSSD parameters, calculated based on two different fiducial points (foot point and maximum slope), with and without outlier correction. The results show that HRV estimation based on finger PPG is feasible during rest and mild mental stress, but can give large errors during mild physical exercise. A good estimation is very dependent on outlier correction and fiducial point selection, and SDNN seems to be a more robust parameter compared to RMSSD for PPG-based HRV estimation.
The objective of this study was to classify 27 cardiac abnormalities based on a data set of 43101 ECG recordings. A hybrid model combining a rule-based algorithm with different deep learning architectures was developed.We compared two different Convolutional Neural Networks, a Fully Convolutional Neural Network and an Encoder Network, a combination of both, and with the addition of another neural network using age and gender as input. Two of these combinations were finally combined with a rule-based model using derived ECG features. The performance of the models was evaluated on validation data during model development using hold-out validation. Finally, the models were deployed to a Docker image, trained on the provided development data, and tested on the Challenge validation set. The model that performed best on the Challenge validation set was then deployed and tested on the full Challenge test set. The performance was evaluated based on a particular Challenge score.Our team, TeamUIO, achieved a Challenge validation score of 0.377, and a full test score of 0.206 for our best model. The score on the full test set placed us at 20th out of 41 teams in the official ranking.
MedAI: Transparency in Medical Image Segmentation is a challenge held for the first time at the Nordic AI Meet that focuses on medical image segmentation and transparency in machine learning (ML)-based systems. We propose three tasks to meet specific gastrointestinal image segmentation challenges collected from experts within the field, including two separate segmentation scenarios and one scenario on transparent ML systems. The latter emphasizes the need for explainable and interpretable ML algorithms. We provide a development dataset for the participants to train their ML models, tested on a concealed test dataset.
Colorectal cancer is one of the deadliest and most widespread types of cancer in the world. Colonoscopy is the procedure used to detect and diagnose polyps from the colon, but today's detection rate shows a significant error rate that affects diagnosis and treatment. An automatic image segmentation algorithm may help doctors to improve the detection rate of pathological polyps in the colon. Furthermore, segmenting endoscopic tools in images taken during colonoscopy may contribute towards robotic assisted surgery. In this study, we trained and validated both pre-trained and not pre-trained segmentation models on two different data sets, containing images of polyps and endoscopic tools. Finally, we applied the models on two separate test sets and the best polyp model got a dice score 0.857 and the test instrument model got a dice score 0.948. Moreover, we found that pre-training of the models increased the performance in segmenting polyps and endoscopic tools.
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