Diversity inventories are critical to creating accurate species range maps and estimating population sizes, which in turn lead to better informed landscape and wildlife management decisions. Metabarcoding has facilitated large-scale environmental diversity surveys. However, the use of a metabarcoding approach with bird feces to survey arthropod diversity is still relatively undeveloped. The aim of this study was to see if and how a metabarcoding approach with bird feces could contribute to a saproxylic Coleoptera survey of traditional insect traps. We compared two methods of surveying saproxylic Coleoptera diversity (metabarcoding birds feces and deploying traditional traps) over two elevations in a mountain system. The two methods caught different species and different levels of functional guild richness. The metabarcoding method successfully recorded both distinct and overlapping portions of diversity from traditional collections, and the approach was also effective in signaling the presence of both rare species and nine country records. Our results show that metabarcoding Passerine bird feces can be successful when used alongside traditional collection methods to capture a broad diversity of saproxylic Coleoptera. This method, however, has quantitative and qualitative limitations, including the inability to produce species abundance data as well as the generation of false positives and negatives due to biases within the metabarcoding pipeline. Implications for insect conservation As many terrestrial ecosystems lose insect diversity, insect diversity surveys are essential to understand the scope of the loss. Despite metabarcoding approach shortcomings, the declining costs and shorter survey and processing time required for this approach compared to traditional survey methods indicate that it can be a valuable addition to the toolkit for saproxylic Coleoptera diversity surveys.
High-elevation insectivorous birds are currently confronted with the reality of a changing climate, land use shifts, and the decline of many prey groups. The diet dynamics among many imperiled animals in this group are still unresolved. Examining the diets of tree-line Passerine birds to the species level of the prey allows for stronger population predictions. This study uses DNA metabarcoding to identify prey arthropods from adult Passerine bird feces at and slightly below tree-line in a Pyrenean forest. Our objective was to quantify the intra-and inter-species richness and overlap of Passerine bird diet over time and space. The results showed that adult Passerine diets have high inter- and intra-species dietary variability and low inter- and intra-species dietary overlap. The lack of association between dietary richness and open space, season, and elevation and lack of differences between dietary overlap and open space and elevation suggest high-elevation Passerine birds have very high dietary flexibility. The results also showed that aphids known to be pests to conifers, and other conifer pests, were prevalent in the birds’ diets. The Passerine diets and high rate of rare dietary items are mainly in line with other recent DNA metabarcoding studies. Implications for the long-term projections relative to tree-line Passerine populations are discussed.
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