Bacteria and fungi are thought to degrade cellulose through the activity of either a complexed or a noncomplexed cellulolytic system composed of endoglucanases and cellobiohydrolases. The marine bacterium Saccharophagus degradans 2-40 produces a multicomponent cellulolytic system that is unusual in its abundance of GH5-containing endoglucanases. Secreted enzymes of this bacterium release high levels of cellobiose from cellulosic materials. Through cloning and purification, the predicted biochemical activities of the one annotated cellobiohydrolase Cel6A and the GH5-containing endoglucanases were evaluated. Cel6A was shown to be a classic endoglucanase, but Cel5H showed significantly higher activity on several types of cellulose, was the highest expressed, and processively released cellobiose from cellulosic substrates. Cel5G, Cel5H, and Cel5J were found to be members of a separate phylogenetic clade and were all shown to be processive. The processive endoglucanases are functionally equivalent to the endoglucanases and cellobiohydrolases required for other cellulolytic systems, thus providing a cellobiohydrolase-independent mechanism for this bacterium to convert cellulose to glucose.The microbial degradation of cellulose is of interest due to applications in the sugar-dependent production of alternative biofuels (25). There are well-characterized cellulolytic systems of bacteria and fungi that employ multiple endo-acting glucanases and exo-acting cellobiohydrolases in the degradation of cellulose (12). For example, the noncomplexed cellulase system of the wood soft rot fungus Hypocrea jecorina (anamorph Trichoderma reesei), the source for most commercially available cellulase preparations, produces up to eight secreted -1,4-endoglucanases (Cel5A, Cel5B, Cel7B, Cel12A, Cel45A, Cel61A, Cel61B, and Cel61C), two cellobiohydrolases (Cel6A and Cel7A), and several -glucosidases (e.g., Bgl3A) (21). Cellobiohydrolases are critical to the function of these systems, as, for example, Cel7A comprises in excess of 50% of the cellulases secreted by this organism (11). Another well-characterized noncomplexed cellulase system is found in Thermobifida fusca, a filamentous soil bacterium that is a major degrader of organic material found in compost piles (32). This bacterium also secretes several endoglucanases and end-specific cellobiohydrolases to degrade cellulose (32). An alternative mechanism for degradation of cellulose is found in microorganisms producing complexed cellulolytic systems, such as those found in cellulolytic clostridia. In these microorganisms, several -1,4-endoglucanases and cellobiohydrolases assemble on surface-associated scaffoldin polypeptides to form cellulose-degrading multiprotein complexes known as cellulosomes (2, 6). The unifying theme in both complexed and noncomplexed systems is the importance of cellobiohydrolases in converting cellulose and cellodextrins to soluble cellobiose.Recently, a complete cellulolytic system was reported to occur in the marine bacterium Saccharophagus degradans 2-40 ...
Recent advances in hardware and software virtualization offer unprecedented management capabilities for the mapping of virtual resources to physical resources. It is highly desirable to further create a "service hosting abstraction" that allows application owners to focus on service level objectives (SLOs) for their applications. This calls for a resource management solution that achieves the SLOs for many applications in response to changing data center conditions and hides the complexity from both application owners and data center operators. In this paper, we describe an automated capacity and workload management system that integrates multiple resource controllers at three different scopes and time scales. Simulation and experimental results confirm that such an integrated solution ensures efficient and effective use of data center resources while reducing service level violations for high priority applications.
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