Crown rot (CR), caused by various Fusarium species, is a chronic wheat disease in Australia. As part of our objective of improving the efficiency of breeding CR resistant wheat varieties, we have been searching for novel sources of resistance. This paper reports on the genetic control of one of these newly identified resistant genotypes, 'CSCR6'. A population derived from a cross between CSCR6 and an Australian variety 'Lang' was analyzed using two Fusarium isolates belonging to two different species, one Fusarium pseudograminearum and the other Fusarium graminearum. The two isolates detected QTL with the same chromosomal locations and comparable magnitudes, indicating that CR resistance is not species-specific. The resistant allele of one of the QTL was derived from 'CSCR6'. This QTL, designated as Qcrs.cpi-3B, was located on the long arm of chromosome 3B and explains up to 48.8% of the phenotypic variance based on interval mapping analysis. Another QTL, with resistant allele from the variety 'Lang', was located on chromosome 4B. This QTL explained up to 22.8% of the phenotypic variance. A strong interaction between Qcsr.cpi-3B and Qcsr.cpi-4B was detected, reducing the maximum effect of Qcrs.cpi-3B to 43.1%. The effects of Qcrs.cpi-3B were further validated in four additional populations and the presence of this single QTL reduced CR severity by up to 42.1%. The fact that significant effects of Qcrs.cpi-3B were detected across all trials with different genetic backgrounds and with the use of isolates belonging to two different Fusarium species make it an ideal target for breeding programs as well as for further characterization of the gene(s) involved in its resistance.

Compared with hexaploid wheat, tetraploid durum is more susceptible to Fusarium crown rot (FCR) infection. The feasibility of enhancing FCR resistance in durum wheat by introgressing chromosome segments of hexaploid wheat was investigated by generating and analysing a backcross population derived from a susceptible durum wheat variety 'Bellaroi' (recurrent parent) and a resistant hexaploid genotype 'CSCR6' (donor parent). Together with a few scattered segments on various chromosomes, segments of a large section of the donor chromosome 6B showed a significant effect in enhancing FCR resistance in the durum background. However, a known major locus on the donor 3BL conferring high level of resistance to FCR in hexaploid wheat failed to provide any improvement in resistance than that of the genome average once it was introduced into the durum wheat. A small proportion of the backcross population gave similar resistance to the bread wheat variety 'Kennedy', a level of FCR resistance acceptable to durum growers. These lines share a 4B segment from the hexaploid donor, although the segment was not among those with the largest individual effect across the whole population. These results show that it is feasible to improve FCR resistance of durum wheat by exploiting hexaploid chromosome segments, although resistance loci of the hexaploid wheat may not function properly in durum backgrounds.