The tree composition in cocoa agroforestry systems (CAFS) in Guatemala is valued for providing a number of ecosystem services. Despite the importance of the trees in these systems, little is known about the tree species richness and its contribution to the conservation of diversity. We studied the botanical composition of CAFS of different ages in the Alta Verapaz department of Guatemala. In total, 70 survey plots with a size of 2500 m2 were established. An inventory was carried out in each sampling unit, recording the tree species present and measuring the diameter at breast height (DBH 1.30 m) and the height of each tree. The Importance Value Index (IVI) was calculated and species richness and the similarity between sites were evaluated. A total of 2519 trees, belonging to 59 species and 34 families were identified. The species with the highest IVI was Gliricidia sepium (Jacq.) Kunth. The CAFSs with the highest and lowest species richness were those of 9-12 and 27 years old, respectively (H´=1.99, H´=0.34). This behavior can be explained by the fact that growers work to enrich the agroforestry systems with a broad diversity of species in the first years which they then begin to harvest at around 16 years of age. A discriminant analysis of principal components (DAPC) and the Jaccard Similarity Index were used to show that several AFS were similar in terms of composition and botanical diversity. Given the tree diversity within the CAFS, these can be acknowledged as areas with good potential for the conservation of overall biodiversity. We recommend education programs for local growers about the benefits of shade management during the production cycle of cocoa to preserve the botanical composition and structural complexity of the AFS.

<p><strong>Background. </strong>For the Guatemalan culture, the avocado (<em>Persea americana</em> Mill) represents more than a crop, since it has religious, mythical, economical, and medicinal significance typical of the center of domestication of the species. Although there is speculation about the wide variability of wild avocado germplasm, there are no studies describing avocado populations. <strong>Objective.</strong> To explore wild germplasm based on agro-morphological characteristics using the standardized descriptors for avocado (<em>Persea</em> spp.). <strong>Methodology. </strong>The distribution of characteristics of 189 avocado trees across eight populations was evaluated using cross-tabulation and Chi-square testing. In order to properly handle qualitative and quantitative data, it was employed the factor analysis of mixed data (FAMD) and hierarchical clustering on principal components (HCPC) to analyze the relationship and variation of features within and between populations. <strong>Results.</strong> The samples showed various morphological characteristics that indicate the presence of Mexican, Guatemalan, and West Indian avocado races in Guatemala. The FAMD revealed that the fruit shape, skin color and flesh texture, and anise odor in the leaves are ideal traits for distinguishing between individual trees. At the population level, the HCPC showed considerable variance amongst the studied trees but no distinct geographic groups of the samples. <strong>Implications.</strong> Although not all wild avocados grown in Guatemala are of the highest quality, several trees of extraordinary excellence are strewn over the republic's highlands. Thus, due to the danger posed by the introduction of commercial varieties, it is advisable preserving the germplasm. <strong>Conclusion. </strong>The clustering methods revealed that the 189 avocado trees could be regrouped into three main clusters. The morphological descriptors proved to be useful for grouping trees according to known races and can therefore be used in the characterization of cultivars and wild trees whose ancestry is unknown.</p>