Functional screening of yeast artificial chromosomes was previously used to isolate and clone the accessory factor, or second chain, of the human IFN-␥ 1 receptor (Soh et al., 1993(Soh et al., , 1994a(Soh et al., , 1994bCook et al., 1993Cook et al., , 1994 and more recently to identify a YAC (the F136C5 YAC or ␣YAC) which contains the genes required for responsiveness to human interferon ␣ (Hu-IFN-␣), human interferon  (Hu-IFN-), and human interferon (Hu-IFN-), the type I interferons (Soh et al., 1994b). The ␣YAC encodes components of the type I interferon receptor (also called the IFN-␣ receptor) and contains at least two genes encoding subunits of this receptor complex (Soh et al., 1994b;Cleary et al., 1994;Emanuel, 1995): the first subunit identified, designated Hu-IFN-␣R1 (Uzé et al., 1990), and a second receptor subunit designated Hu-IFN-␣R2 (Novick et al., 1994). In addition, the ␣YAC encodes the gene for CRFB4, a transmembrane protein which, like the aforementioned subunits, is a member of the cytokine type II receptor family (Lutfalla et al., 1993), but which so far has no defined role in signal transduction in response to the type I interferons.In the process of isolating cDNA clones for the Hu-IFN-␣R1 chain, a splice variant of the Hu-IFN-␣R1 chain was discovered. This splice variant, designated Hu-IFN-␣R1s, was shown to be missing exons 4 and 5, which encode one of four subdomains of the extracellular domain of the receptor (Cleary et al., 1992;Cleary, 1995). The function of the Hu-IFN-␣R1s chain could not be readily ascertained because the individual components of the Hu-IFN-␣ receptor have not been identified. However, Cleary et al. (1994) reported that hamster cells containing a disrupted ␣YAC (or ⌬␣YAC) are incapable of responding to Hu-IFN-␣A and Hu-IFN-␣B2, but become fully responsive when transfected with an expression vector for the Hu-IFN-␣R1 chain. Therefore, the ⌬␣YAC expresses all genes required for human IFN-␣ responsiveness except for IFNAR1. These cells containing the ⌬␣YAC, designated 16-9/⌬␣YAC, made it possible to examine the function of Hu-IFN-␣R1s and the interaction of various type I human interferons with the Hu-IFN-␣R1 and Hu-IFN-␣R1s chains as described in this report.
EXPERIMENTAL PROCEDURESCells-The 16-9 cell line is a human ϫ hamster hybrid containing the long arm of human chromosome 6 and a transfected HLA-B7 gene (Cook et al., 1994). The 16-9/␣YAC cells were obtained by transforming 16-9 cells with the ␣YAC (F136C5) as described (Soh et al., 1994b); 16-9/ ⌬␣YAC cells contain the deleted ⌬␣YAC whose IFNAR1 gene was disrupted by homologous recombination (Cleary et al., 1994); 16-9/ ⌬␣YAC/␣R1 cells are the 16-9/⌬␣YAC cell line transfected with the cDNA clone for Hu-IFN-␣R1; and the 16-9/⌬␣YAC/␣R1s cell line is a 16-9/⌬␣YAC cell line transfected with the cDNA clone for the Hu-IFN␣R1s. The 16-9 cell line was maintained in F12 medium plus 10% fetal bovine serum. The 16-9/␣YAC and 16-9/⌬␣YAC cell lines were grown in F12 plus 10% fetal bovine serum and 350 g/ml antibiotic G418....