Phenotyping, via remote and proximal sensing techniques, of the agronomic and physiological traits associated with yield potential and drought adaptation could contribute to improvements in breeding programs. In the present study, 384 genotypes of wheat (Triticum aestivum L.) were tested under fully irrigated (FI) and water stress (WS) conditions. The following traits were evaluated and assessed via spectral reflectance: Grain yield (GY), spikes per square meter (SM2), kernels per spike (KPS), thousand-kernel weight (TKW), chlorophyll content (SPAD), stem water soluble carbohydrate concentration and content (WSC and WSCC, respectively), carbon isotope discrimination (Δ13C), and leaf area index (LAI). The performances of spectral reflectance indices (SRIs), four regression algorithms (PCR, PLSR, ridge regression RR, and SVR), and three classification methods (PCA-LDA, PLS-DA, and kNN) were evaluated for the prediction of each trait. For the classification approaches, two classes were established for each trait: The lower 80% of the trait variability range (Class 1) and the remaining 20% (Class 2 or elite genotypes). Both the SRIs and regression methods performed better when data from FI and WS were combined. The traits that were best estimated by SRIs and regression methods were GY and Δ13C. For most traits and conditions, the estimations provided by RR and SVR were the same, or better than, those provided by the SRIs. PLS-DA showed the best performance among the categorical methods and, unlike the SRI and regression models, most traits were relatively well-classified within a specific hydric condition (FI or WS), proving that classification approach is an effective tool to be explored in future studies related to genotype selection.
Summary. The beauty of the Kohonen map is that it has the property of organizing the codebook vectors, which represent the data points, both with respect to the underlying distribution and topologically. This topology is traditionally linear, even though the underlying lattice could be a grid, and this has been used in a variety of applications [19,25,28]. The most prominent efforts to render the topology to be structured involves the Evolving Tree (ET) due to Pakkanen et al. [26], and the Self-Organizing Tree Maps (SOTM) due to Guan et al. [15], among others. In this paper we propose a strategy, the Tree-based Topology-Oriented SOM (TTO-SOM) by which we can impose an arbitrary, user-defined, tree-like topology onto the codebooks. Such an imposition enforces a neighborhood phenomenon which is based on the user-defined tree, and consequently renders the so-called bubble of activity to be drastically different from the ones defined in the prior literature. The map learnt as a consequence of training with the TTO-SOM is able to infer both the distribution of the data and its structured topology interpreted via the perspective of the user-defined tree. The TTO-SOM also reveals multi-resolution capabilities, which are helpful for representing the original data set with different numbers of points, and this can be obtained without the necessity of recomputing the whole tree. The ability to extract an skeleton, which is a "stick-like" representation of the image in a lower dimensional space, is discussed as well. These properties has been confirmed by our experimental results on a variety of data sets.
Currently, in Chile, more than a quarter-million of patients are waiting for an elective surgical intervention. This is a worldwide reality, and it occurs as the demand for healthcare is vastly superior to the clinical resources in public systems. Moreover, this phenomenon has worsened due to the COVID-19 sanitary crisis. In order to reduce the impact of this situation, patients in the waiting lists are ranked according to a priority. However, the existing prioritization strategies are not necessarily systematized, and they usually respond only to clinical criteria, excluding other dimensions such as the personal and social context of patients. In this paper, we present a decision-support system designed for the prioritization of surgical waiting lists based on biopsychosocial criteria. The proposed system features three methodological contributions; first, an ad-hoc medical record form that captures the biopsychosocial condition of the patients; second, a dynamic scoring scheme that recognizes that patients’ conditions evolve differently while waiting for the required elective surgery; and third, a methodology for prioritizing and selecting patients based on the corresponding dynamic scores and additional clinical criteria. The designed decision-support system was implemented in the otorhinolaryngology unit in the Hospital of Talca, Chile, in 2018. When compared to the previous prioritization methodology, the results obtained from the use of the system during 2018 and 2019 show that this new methodology outperforms the previous prioritization method quantitatively and qualitatively. As a matter of fact, the designed system allowed a decrease, from 2017 to 2019, in the average number of days in the waiting list from 462 to 282 days.
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