The myxozoan Henneguya ictaluri is cited as the cause of proliferative gill disease (PGD) in Channel Catfish Ictalurus punctatus and Channel × Blue Catfish I. furcatus hybrids. Differences in host susceptibility result in decreased transmission rates, reduced sporogenesis, and lesser incidence of PGD in hybrid catfish. In experimental pond trials, continuous monoculture of hybrid catfish suppressed H. ictaluri abundance in pond systems compared to Channel Catfish monoculture. The present study examined differences in myxozoan community structure in catfish ponds stocked with Channel Catfish or hybrid catfish. Experimental ponds (0.4 ha) dedicated to Channel Catfish or hybrid catfish monoculture were maintained over three production cycles. Pond water collected during the spring of each year was subjected to metagenomic analysis by targeted amplicon sequencing of a diagnostic hypervariable region (DVR3) of the myxozoan 18S ribosomal RNA gene. Relative abundance of H. ictaluri was significantly greater in Channel Catfish ponds than in hybrid catfish ponds during years 2 and 3. In hybrid catfish ponds, H. ictaluri never exceeded 20% average relative abundance. Hybrid catfish ponds also revealed decreased myxozoan diversity and species evenness compared to Channel Catfish ponds, suggesting that myxozoan taxa associated with Channel Catfish may not be well adapted to the hybridized host. Results corroborate previous research indicating that hybrid catfish monoculture can suppress H. ictaluri compared to ponds that are devoted to Channel Catfish. These data imply that alternating catfish culture species in ponds (crop rotation) has the potential to mitigate PGD by precluding H. ictaluri from accumulating within ponds to levels associated with disease and catastrophic loss. Further, this work identified numerous previously unidentified taxa present within these systems that clustered phylogenetically with both catfish and noncatfish hosts. The impacts that these other myxozoans have on catfish health and production are unknown, but their presence indicates that myxozoan diversity within catfish aquaculture ponds has been greatly underestimated and is significantly influenced by stocking choice.

Bolbophorus damnificus is a digenetic trematode causing significant economic losses within the United States commercial catfish industry. The indirect life cycle is complex, requiring piscivorous birds, aquatic snails, and fish to complete. With federal protections on many piscivorous birds and no FDA‐approved therapeutic treatment for trematode infections in fish, management within the catfish industry is primarily limited to controlling the snail host. Planorbella trivolvis and Biomphalaria havanensis are snails commonly found in commercial catfish ponds and known to transmit B. damnificus. This study evaluated a low‐cost snail trap prototype for monitoring populations of these snails in efforts to better inform treatment regimes. Snail traps were deployed into ponds on a commercial catfish farm and checked weekly throughout the production season. All snails were identified and counted to evaluate trap efficacy. Traps captured significantly more snails in foodfish ponds than in fingerling ponds; however, this trend was not present in monthly box samples. B. havanensis was rarely collected and was only found consistently within one pond, while P. trivolvis was routinely collected from all ponds, although abundance varied widely among ponds. Snail traps could be a useful, low‐cost method to monitor snail populations within ponds and better inform control treatments.

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