Soils are one of the first selective environments a seed experiences and yet little is known about the evolutionary consequences of plant-soil feedbacks. We have previously found that plant phytochemical traits in a model system, Populus spp., influence rates of leaf litter decay, soil microbial communities and rates of soil net nitrogen mineralization. Utilizing this natural variation in plant-soil linkages we examined two related hypotheses:(1) Populus angustifolia seedlings are locally adapted to their native soils; and (2) Soils act as agents of selection, differentially affecting seedling survival and the heritability of plant traits. We conducted a greenhouse experiment by planting seedlings from 20 randomly collected P. angustifolia genetic families in soils conditioned by various Populus species and measured subsequent survival and performance. Even though P. angustifolia soils are less fertile overall, P. angustifolia seedlings grown in these soils were twice as likely to survive, grew 24% taller, had 27% more leaves, and 29% greater above-ground biomass than P. angustifolia seedlings grown in non-native P. fremontii or hybrid soils. Increased survival resulted in higher trait variation among seedlings in native soils compared to seedlings grown in non-native soils. Soil microbial biomass varied significantly across soil environments which could explain more of the variation in seedling performance than soil
Numerous therapeutically relevant small molecules have been identified from the screening of natural products (NPs) produced by environmental bacteria. These discovery efforts have principally focused on culturing bacteria from natural environments rich in biodiversity. We sought to assess the biosynthetic capacity of urban soil environments using a phylogenetic analysis of conserved NP biosynthetic genes amplified directly from DNA isolated from New York City park soils. By sequencing genes involved in the biosynthesis of nonribosomal peptides and polyketides, we found that urban park soil microbiomes are both rich in biosynthetic diversity and distinct from nonurban samples in their biosynthetic gene composition. A comparison of sequences derived from New York City parks to genes involved in the biosynthesis of biomedically important NPs produced by bacteria originally collected from natural environments around the world suggests that bacteria producing these same families of clinically important antibiotics, antifungals, and anticancer agents are actually present in the soils of New York City. The identification of new bacterial NPs often centers on the systematic exploration of bacteria present in natural environments. Here, we find that the soil microbiomes found in large cities likely hold similar promise as rich unexplored sources of clinically relevant NPs.
Summary1. There is relatively little information on how evolutionary processes that alter genetic variation in a focal species may affect interactions with other species, impact the structure or function of the community and ecosystem, and affect evolutionary feedbacks among interacting species through time. 2. Because evolution can occur at ecological time-scales, it is important to understand how major selective events, such as climatic changes, can impact the community of interacting species and ecosystem processes by changing intraspecific genetic variation. 3. The evidence linking genetic variation and evolution to community change and feedbacks has arisen from several different approaches whose results have not been synthesized into one conceptual framework, and whose commonalities may not be fully understood. 4. This review synthesizes several different experimental approaches on how evolution may impact communities and ecosystems and focuses on five main issues: (i) the genetic basis to communities and ecosystems; (ii) the community and ecosystem consequences of among-population genetic differentiation; (iii) the role of local adaptation and co-evolution; (iv) the effects of transgenerational feedbacks and the eco-evo dynamic and; (v) the integration of community and ecosystem genetics and multi-level selection. 5. Evolution can alter intraspecific genetic variation to affect indirect genetic effects and feedbacks. Future studies should investigate how communities and ecosystems are affected when evolution causes the strength of feedbacks to change.
Cities are increasingly focused on expanding tree canopy cover as a means to improve the urban environment by, for example, reducing heat island effects, promoting better air quality, and protecting local habitat. The majority of efforts to expand canopy cover focus on planting street trees or on planting native tree species and removing nonnatives in natural areas through reforestation. Yet many urban canopy assessments conducted at the city‐scale reveal co‐dominance by nonnative trees, fueling debates about the value of urban forests and native‐specific management targets. In contrast, assessments within cities at site or park scales find that some urban forest stands harbor predominantly native biodiversity. To resolve this apparent dichotomy in findings, about the extent to which urban forests are native dominated, between the city‐scale canopy and site‐level assessments, we measure forest structure and composition in 1,124 plots across 53 parks in New York City's 2,497 ha of natural area forest. That is, we assess urban forests at the city‐scale and deliberately omit sampling trees existing outside of forest stands but which are enumerated in citywide canopy assessments. We find that on average forest stand canopy is comprised of 82% native species in New York City forests, suggesting that conclusions that the urban canopy is co‐dominated by nonnatives likely results from predominantly sampling street trees in prior city‐scale assessments. However, native tree species’ proportion declines to 75% and 53% in the midstory and understory, respectively, suggesting potential threats to the future native dominance of urban forest canopies. Furthermore, we find that out of 57 unique forest types in New York City, the majority of stands (81%) are a native type. We find that stand structure in urban forest stands is more similar to rural forests in New York State than to stand structure reported for prior assessments of the urban canopy at the city scale. Our results suggest the need to measure urban forest stands apart from the entire urban canopy. Doing so will ensure that city‐scale assessments return data that align with conservation policy and management strategies that focus on maintaining and growing native urban forests rather than individual trees.
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