We present a general mixed quantum classical method that couples classical Molecular Dynamics (MD) and vibronic models to compute the shape of electronic spectra of flexible molecules in condensed phase without, in principle, any phenomenological broadening. It is based on a partition of the nuclear motions of the solute+solvent system in "soft" and "stiff" vibrational modes, and an adiabatic hypothesis that assumes that stiff modes are much faster than soft ones. In this framework the spectrum is rigorously expressed as a conformational integral of quantum vibronic spectra along the stiff coordinates only. Soft modes enter at classical level through the conformational distribution that is sampled with classical MD runs. At each configuration, reduced-dimensionality quadratic Hamiltonians are built in the space of the stiff coordinates only, thanks to a generalization of the Vertical Hessian harmonic model and an iterative application of projectors in internal coordinates to remove soft modes. Quantum vibronic spectra, specific for each sampled configuration of the soft coordinates, are then computed at the desired temperature with efficient time-dependent techniques, and the global spectrum simply arises from their average. For consistency of the whole procedure, classical MD runs are performed with quantum-mechanically derived force fields, parameterized at the same level of theory selected for generating the quadratic Hamiltonians along the stiff coordinates. Application to N-methyl-6-oxyquinolinium betaine in water, dithiophene in ethanol, and a flexible cyanidine in water are presented to show the performance of the method.
We have recently proposed a protocol for Quantum Dynamics (QD) calculations, which is based on a parameterisation of Linear Vibronic Coupling (LVC) Hamiltonians with Time Dependent (TD) Density Functional Theory (TD-DFT), and exploits the latest developments in multiconfigurational TD-Hartree methods for an effective wave packet propagation. In this contribution we explore the potentialities of this approach to compute nonadiabatic vibronic spectra and ultrafast dynamics, by applying it to the five nucleobases present in DNA and RNA. For all of them we computed the absorption spectra and the dynamics of ultrafast internal conversion (100 fs timescale), fully coupling the first 2–3 bright states and all the close by dark states, for a total of 6–9 states, and including all the normal coordinates. We adopted two different functionals, CAM-B3LYP and PBE0, and tested the effect of the basis set. Computed spectra are in good agreement with the available experimental data, remarkably improving over pure electronic computations, but also with respect to vibronic spectra obtained neglecting inter-state couplings. Our QD simulations indicate an effective population transfer from the lowest energy bright excited states to the close-lying dark excited states for uracil, thymine and adenine. Dynamics from higher-energy states show an ultrafast depopulation toward the more stable ones. The proposed protocol is sufficiently general and automatic to promise to become useful for widespread applications.
Here
we report the synthesis of two polyhelicene frameworks consisting,
from end-to-end, of 18 and 24 fused benzene rings. The latter exhibits
the largest electronic circular dichroism in the visible spectrum
of any molecule. These shape-persistent helical nanoribbons incorporate
multiple helicenes, a class of contorted polycyclic aromatic molecules
consisting of ortho-annulated rings. These conjugated,
chiral molecules have interesting chemical, biological, and chiroptical
properties; however, there are very few helicenes with extraordinary
chiroptical response over a broad range of the visible spectruma
key criterion for applications such as chiral optoelectronics. In
this report, we show that coupling the polyhelicene framework with
multiple perylene-diimide subunits elicits a significant chiroptic
response. Notably, the molar circular dichroism increases faster than
the absorptivity of these molecules as their helical axis lengthens.
Computational analysis reveals that the greatly amplified circular
dichroism arises from exciton-like interactions between the perylene-diimide
and the helicene moieties. We predict that even greater chiroptic
enhancement will result from further axial elongation of these nanoribbons,
which can be readily enabled via the iterative synthetic method presented
herein.
Paper published as part of the special topic on Quantum Dynamics with ab Initio Potentials
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