The manuscript describes the “digital transcriptome atlas” of the developing mouse embryo, a powerful resource to determine co-expression of genes, to identify cell populations and lineages and to identify functional associations between genes relevant to development and disease.

Eye movements can be consciously controlled by humans to the extent of performing sequences of predefined movement patterns, or 'gaze gestures'. Gaze gestures can be tracked noninvasively employing a video-based eye tracking system. Gaze gestures hold the potential to become an emerging input paradigm in the context of human-computer interaction (HCI) as low-cost eye trackers become more ubiquitous. The viability of gaze gestures as an innovative way to control a computer rests on how easily they can be assimilated by potential users and also on the ability of machine learning algorithms to discriminate in real time intentional gaze gestures from typical gaze activity performed during standard interaction with electronic devices. In this work, through a set of experiments and user studies, we evaluate the performance of two different gaze gestures modalities, gliding gaze gestures and saccadic gaze gestures, and their corresponding real-time recognition algorithms, Hierarchical Temporal Memory networks and the Needleman-Wunsch algorithm for sequence alignment. Our results show that a specific combination of gaze gesture modality, namely saccadic gaze gestures, and recognition algorithm, Needleman-Wunsch, allows for reliable usage of intentional gaze gestures to interact with a computer with accuracy rates higher than 95% and completion speeds of around 1.5 to 2.5 seconds per gesture. The optimal gaze gesture modality and recognition algorithm do not interfere with otherwise standard human-computer gaze interaction, generating very few false positives during real time recognition and positive feedback from the users. These encouraging results and the low cost eye tracking equipment used, open up a new HCI paradigm for the fields of accessibility and interaction with smartphones, tablets, projected displays and traditional desktop computers.

For individuals with high degrees of motor disability or locked-in syndrome, it is impractical or impossible to use mechanical switches to interact with electronic devices. Brain computer interfaces (BCIs) can use motor imagery to detect interaction intention from users but lack the accuracy of mechanical switches. Hence, there exists a strong need to improve the accuracy of EEG-based motor imagery BCIs attempting to implement an on/off switch. Here, we investigate how monitoring the pupil diameter of a person as a psycho-physiological parameter in addition to traditional EEG channels can improve the classification accuracy of a switch-like BCI. We have recently noticed in our lab (work not yet published) how motor imagery is associated with increases in pupil diameter when compared to a control rest condition. The pupil diameter parameter is easily accessible through video oculography since most gaze tracking systems report pupil diameter invariant to head position. We performed a user study with 30 participants using a typical EEG based motor imagery BCI. We used common spatial patterns to separate motor imagery, signaling movement intention, from a rest control condition. By monitoring the pupil diameter of the user and using this parameter as an additional feature, we show that the performance of the classifier trying to discriminate motor imagery from a control condition improves over the traditional approach using just EEG derived features. Given the limitations of EEG to construct highly robust and reliable BCIs, we postulate that multi-modal approaches, such as the one presented here that monitor several psycho-physiological parameters, can be a successful strategy in making BCIs more accurate and less vulnerable to constraints such as requirements for long training sessions or high signal to noise ratio of electrode channels.

Recent advancements in Large Language Models (LLMs) suggest imminent commercial applications of such AI systems where they will serve as gateways to interact with technology and the accumulated body of human knowledge. The possibility of political biases embedded in these models raises concerns about their potential misusage. In this work, we report the results of administering 15 different political orientation tests (14 in English, 1 in Spanish) to a state-of-the-art Large Language Model, the popular ChatGPT from OpenAI. The results are consistent across tests; 14 of the 15 instruments diagnose ChatGPT answers to their questions as manifesting a preference for left-leaning viewpoints. When asked explicitly about its political preferences, ChatGPT often claims to hold no political opinions and to just strive to provide factual and neutral information. It is desirable that public facing artificial intelligence systems provide accurate and factual information about empirically verifiable issues, but such systems should strive for political neutrality on largely normative questions for which there is no straightforward way to empirically validate a viewpoint. Thus, ethical AI systems should present users with balanced arguments on the issue at hand and avoid claiming neutrality while displaying clear signs of political bias in their content.

Concerns about gender bias in word embedding models have captured substantial attention in the algorithmic bias research literature. Other bias types however have received lesser amounts of scrutiny. This work describes a large-scale analysis of sentiment associations in popular word embedding models along the lines of gender and ethnicity but also along the less frequently studied dimensions of socioeconomic status, age, physical appearance, sexual orientation, religious sentiment and political leanings. Consistent with previous scholarly literature, this work has found systemic bias against given names popular among African-Americans in most embedding models examined. Gender bias in embedding models however appears to be multifaceted and often reversed in polarity to what has been regularly reported. Interestingly, using the common operationalization of the term bias in the fairness literature, novel types of so far unreported bias types in word embedding models have also been identified. Specifically, the popular embedding models analyzed here display negative biases against middle and working-class socioeconomic status, male children, senior citizens, plain physical appearance and intellectual phenomena such as Islamic religious faith, non-religiosity and conservative political orientation. Reasons for the paradoxical underreporting of these bias types in the relevant literature are probably manifold but widely held blind spots when searching for algorithmic bias and a lack of widespread technical jargon to unambiguously describe a variety of algorithmic associations could conceivably be playing a role. The causal origins for the multiplicity of loaded associations attached to distinct demographic groups within embedding models are often unclear but the heterogeneity of said associations and their potential multifactorial roots raises doubts about the validity of grouping them all under the umbrella term bias. Richer and more fine-grained terminology as well as a more comprehensive exploration of the bias landscape could help the fairness epistemic community to characterize and neutralize algorithmic discrimination more efficiently.