Ocotea is one of the largest genera in the Lauraceae (c. 400 spp.), and it has been known to be paraphyletic with respect to most other genera of the New World Lauraceae for almost 20 years. In the traditional circumscription, Ocotea contains not only Neotropical species, but also about 45 species from the African region, including Macaronesia, Madagascar, and the Comoro and Mascarene Islands. Only a few of the species have been included in previous molecular systematic analyses. Here we present a phylogenetic analysis, based on ITS and psbA-trnH sequences of 168 Lauraceae species, including 151 taxa from the Ocotea complex, among them 26 of the 45 Palaeotropical species currently placed in Ocotea. Our results show that the Old World species belong to two well-supported and morphologically distinguishable clades, one of which is placed unresolved among the Neotropical clades of the Ocotea complex, whereas the other is sister to Cinnamomum section Cinnamomum. The two clades can also be differentiated based morphologically. As a step towards a phylogenetic classification, we recognize the second group as the new genus Kuloa.
Earlier studies indicated that the genus Nectandra, currently the second‐largest genus of the Neotropical Lauraceae, might be diphyletic in its traditional circumscription, but the evidence was not quite conclusive. Our phylogenetic analyses based on nuclear (ITS) and chloroplast (psbA‐trnH) sequences of 45 Nectandra species as well as 42 representatives of 18 genera of the core Lauraceae (Ocotea complex, Laureae, Aiouea, Asian Cinnamomum and Persea groups) confirm the suspicion that Nectandra is diphyletic. The two groups, Nectandra s.str. and the N. coriacea group, are each well supported in the maximum parsimony and Bayesian analyses, but they are not sister to each other. Nectandra s.str. is sister to Pleurothyrium, and the clade including Nectandra s.str. and Pleurothyrium is very likely closer to the dioecious taxa of the Ocotea complex. The N. coriacea group, on the other hand, appears to be closer to bisexual taxa known as the Ocotea helicterifolia group. In addition, Nectandra s.str. is characterized by a large deletion in the psbA‐trnH spacer compared to all other core Lauraceae, including its sister group Pleurothyrium. Considering these facts, Nectandra cannot be maintained in the traditional sense. We therefore transfer the species of the N. coriacea group to the oldest generic name applied to this group, Damburneya. On the basis of fossil records from the American subcontinents and in accordance with previous phylogenetic and molecular clock studies we suggest a scenario of a climate‐driven migration from North to South America, with a subsequent rapid radiation of Nectandra s.str. in South America.
The genus Ocotea (Lauraceae) includes about 450 species, of which about 90% are Neotropical, while the rest is from Macaronesia, Africa and Madagascar. In this study we present the first complete chloroplast genome sequences of seven Ocotea species, six Neotropical and one from Macaronesia. Genome sizes range from 152,630 (O. porosa) to 152,685 bp (O. aciphylla). All seven plastomes contain a total of 131 (114 unique) genes, among which 87 (80 unique) encode proteins. The order of genes (if present) is the same in all Lauraceae examined so far. Two hypervariable loci were found in the LSC region (psbA-trnH, ycf2), three in the SSC region (ycf1, ndhH, trnL(UAG)-ndhF). The pairwise cp genomic alignment between the taxa showed that the LSC and SSC regions are more variable compared to the IR regions. The protein coding regions comprise 25,503–25,520 codons in the Ocotea plastomes examined. The most frequent amino acids encoded in the plastomes were leucine, isoleucine, and serine. SSRs were found to be more frequent in the two dioecious Neotropical Ocotea species than in the four bisexual species and the gynodioecious species examined (87 vs. 75–84 SSRs). A preliminary phylogenetic analysis based on 69 complete plastomes of Lauraceae species shows the seven Ocotea species as sister group to Cinnamomum sensu lato. Sequence divergence among the Ocotea species appears to be much lower than among species of the most closely related, likewise species-rich genera Cinnamomum, Lindera and Litsea.
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