Changes in Lake Superior's fish community are reviewed from 1970 to 2000. Lake trout (Salvelinus namaycush) and lake whitefish (Coregonus clupeaformis) stocks have increased substantially and may be approaching ancestral states. Lake herring (Coregonus artedi) have also recovered, but under sporadic recruitment. Contaminant levels have declined and are in equilibrium with inputs, but toxaphene levels are higher than in all other Great Lakes. Sea lamprey (Petromyzon marinus) control, harvest limits, and stocking fostered recoveries of lake trout and allowed establishment of small nonnative salmonine populations. Natural reproduction supports most salmonine populations, therefore further stocking is not required. Nonnative salmonines will likely remain minor components of the fish community. Forage biomass has shifted from exotic rainbow smelt (Osmerus mordax) to native species, and high predation may prevent their recovery. Introductions of exotics have increased and threaten the recovering fish community. Agencies have little influence on the abundance of forage fish or the major predator, siscowet lake trout, and must now focus on habitat protection and enhancement in nearshore areas and prevent additional species introductions to further restoration. Persistence of Lake Superior's native deepwater species is in contrast to other Great Lakes where restoration will be difficult in the absence of these ecologically important fishes.

Populations of cisco Coregonus artedi in the Laurentian Great Lakes supported large‐scale commercial fisheries and were the primary forage of piscivores during the first half of the 20th century. However, by 1970 populations had collapsed in all of the lakes. Since then, ciscoes have staged a recovery in Lake Superior. In this synthesis, we describe the status of ciscoes in Lake Superior during 1970–2006 and provide a comprehensive review of their ecology. Better understanding of age estimation techniques, application of hydroacoustic and midwater trawl sampling, and compilation of long‐term data sets have advanced our understanding of the species. Management agencies contemplating rehabilitation of cisco populations should recognize that (1) knowledge of cisco ecology and population dynamics is increasing; (2) ciscoes are long‐lived; (3) Great Lakes populations are probably composed of both shallow‐water and deepwater spawning forms; (4) large year‐classes can be produced from small adult stocks; (5) large variation in year‐class strength is probably intrinsic to Great Lakes populations; (6) despite the longevity and early maturity of ciscoes, stocks can be overfished because large year‐classes are produced infrequently; (7) regional environmental factors appear to play a large role in reproductive success; and (8) rainbow smelt Osmerus mordax are likely to have a negative effect on cisco recruitment under certain conditions. A top‐down approach for rehabilitating lake trout Salvelinus namaycush in Lake Superior probably benefited cisco recovery through lake trout predation on invasive rainbow smelt populations. We argue that managing for populations of exotic alewives Alosa pseudoharengus to support popular recreational fisheries of exotic Pacific salmonids in the other Great Lakes conflicts with stocking efforts to rehabilitate native lake trout in those lakes. If native fish rehabilitation is a serious and primary goal for management agencies in the Great Lakes basin, we propose that an ecosystem‐based approach to modifying the environment for the benefit of native fish species (i.e., decimation or eradication of invasive species) is required.

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